These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

105 related articles for article (PubMed ID: 22145529)

  • 1. Identification of true EST alignments for recognising transcribed regions.
    Ma C; Wang J; Li L; Duan MJ; Zhou YH
    Int J Data Min Bioinform; 2011; 5(5):465-84. PubMed ID: 22145529
    [TBL] [Abstract][Full Text] [Related]  

  • 2. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 3. FELINES: a utility for extracting and examining EST-defined introns and exons.
    Drabenstot SD; Kupfer DM; White JD; Dyer DW; Roe BA; Buchanan KL; Murphy JW
    Nucleic Acids Res; 2003 Nov; 31(22):e141. PubMed ID: 14602934
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Analysis of EST-driven gene annotation in human genomic sequence.
    Bailey LC; Searls DB; Overton GC
    Genome Res; 1998 Apr; 8(4):362-76. PubMed ID: 9548972
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Pairagon+N-SCAN_EST: a model-based gene annotation pipeline.
    Arumugam M; Wei C; Brown RH; Brent MR
    Genome Biol; 2006; 7 Suppl 1(Suppl 1):S5.1-10. PubMed ID: 16925839
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Gene structure prediction and alternative splicing analysis using genomically aligned ESTs.
    Kan Z; Rouchka EC; Gish WR; States DJ
    Genome Res; 2001 May; 11(5):889-900. PubMed ID: 11337482
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A novel algorithm for computational identification of contaminated EST libraries.
    Sorek R; Safer HM
    Nucleic Acids Res; 2003 Feb; 31(3):1067-74. PubMed ID: 12560505
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Using ESTs to improve the accuracy of de novo gene prediction.
    Wei C; Brent MR
    BMC Bioinformatics; 2006 Jul; 7():327. PubMed ID: 16817966
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MGAlignIt: A web service for the alignment of mRNA/EST and genomic sequences.
    Lee BT; Tan TW; Ranganathan S
    Nucleic Acids Res; 2003 Jul; 31(13):3533-6. PubMed ID: 12824360
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A comparison of expressed sequence tags (ESTs) to human genomic sequences.
    Wolfsberg TG; Landsman D
    Nucleic Acids Res; 1997 Apr; 25(8):1626-32. PubMed ID: 9092672
    [TBL] [Abstract][Full Text] [Related]  

  • 11. AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome.
    Stanke M; Tzvetkova A; Morgenstern B
    Genome Biol; 2006; 7 Suppl 1(Suppl 1):S11.1-8. PubMed ID: 16925833
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups.
    Jammali S; Aguilar JD; Kuitche E; Ouangraoua A
    BMC Bioinformatics; 2019 Mar; 20(Suppl 3):133. PubMed ID: 30925859
    [TBL] [Abstract][Full Text] [Related]  

  • 13. PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text.
    Pirola Y; Rizzi R; Picardi E; Pesole G; Della Vedova G; Bonizzoni P
    BMC Bioinformatics; 2012 Apr; 13 Suppl 5(Suppl 5):S2. PubMed ID: 22537006
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Transcriptome and genome conservation of alternative splicing events in humans and mice.
    Sugnet CW; Kent WJ; Ares M; Haussler D
    Pac Symp Biocomput; 2004; ():66-77. PubMed ID: 14992493
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Fast and sensitive algorithm for aligning ESTs to human genome.
    Ogasawara J; Morishita S
    Proc IEEE Comput Soc Bioinform Conf; 2002; 1():43-53. PubMed ID: 15838122
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Evaluation of EST-data using the genome assembly.
    Murray CG; Larsson TP; Hill T; Björklind R; Fredriksson R; Schiöth HB
    Biochem Biophys Res Commun; 2005 Jun; 331(4):1566-76. PubMed ID: 15883052
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A fast and sensitive algorithm for aligning ESTs to the human genome.
    Ogasawara J; Morishita S
    J Bioinform Comput Biol; 2003 Jul; 1(2):363-86. PubMed ID: 15303288
    [TBL] [Abstract][Full Text] [Related]  

  • 18. cDNA sequences reveal considerable gene prediction inaccuracy in the Plasmodium falciparum genome.
    Lu F; Jiang H; Ding J; Mu J; Valenzuela JG; Ribeiro JM; Su XZ
    BMC Genomics; 2007 Jul; 8():255. PubMed ID: 17662120
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Non-EST based prediction of exon skipping and intron retention events using Pfam information.
    Hiller M; Huse K; Platzer M; Backofen R
    Nucleic Acids Res; 2005; 33(17):5611-21. PubMed ID: 16204458
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Splign: algorithms for computing spliced alignments with identification of paralogs.
    Kapustin Y; Souvorov A; Tatusova T; Lipman D
    Biol Direct; 2008 May; 3():20. PubMed ID: 18495041
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.