177 related articles for article (PubMed ID: 22171319)
1. A framework for intelligent data acquisition and real-time database searching for shotgun proteomics.
Graumann J; Scheltema RA; Zhang Y; Cox J; Mann M
Mol Cell Proteomics; 2012 Mar; 11(3):M111.013185. PubMed ID: 22171319
[TBL] [Abstract][Full Text] [Related]
2. MaxQuant Software for Ion Mobility Enhanced Shotgun Proteomics.
Prianichnikov N; Koch H; Koch S; Lubeck M; Heilig R; Brehmer S; Fischer R; Cox J
Mol Cell Proteomics; 2020 Jun; 19(6):1058-1069. PubMed ID: 32156793
[TBL] [Abstract][Full Text] [Related]
3. MaxQuant.Live Enables Global Targeting of More Than 25,000 Peptides.
Wichmann C; Meier F; Virreira Winter S; Brunner AD; Cox J; Mann M
Mol Cell Proteomics; 2019 May; 18(5):982-994. PubMed ID: 30755466
[TBL] [Abstract][Full Text] [Related]
4. Online Parallel Accumulation-Serial Fragmentation (PASEF) with a Novel Trapped Ion Mobility Mass Spectrometer.
Meier F; Brunner AD; Koch S; Koch H; Lubeck M; Krause M; Goedecke N; Decker J; Kosinski T; Park MA; Bache N; Hoerning O; Cox J; Räther O; Mann M
Mol Cell Proteomics; 2018 Dec; 17(12):2534-2545. PubMed ID: 30385480
[TBL] [Abstract][Full Text] [Related]
5. Andromeda: a peptide search engine integrated into the MaxQuant environment.
Cox J; Neuhauser N; Michalski A; Scheltema RA; Olsen JV; Mann M
J Proteome Res; 2011 Apr; 10(4):1794-805. PubMed ID: 21254760
[TBL] [Abstract][Full Text] [Related]
6. Coisolation of Peptide Pairs for Peptide Identification and MS/MS-Based Quantification.
Smith IR; Eng JK; Barente AS; Hogrebe A; Llovet A; Rodriguez-Mias RA; Villén J
Anal Chem; 2022 Nov; 94(44):15198-15206. PubMed ID: 36306373
[TBL] [Abstract][Full Text] [Related]
7. MaxQuant.Live Enables Global Targeting of More Than 25,000 Peptides.
Wichmann C; Meier F; Virreira Winter S; Brunner AD; Cox J; Mann M
Mol Cell Proteomics; 2019 May; 18(5):982-994. PubMed ID: 33451795
[TBL] [Abstract][Full Text] [Related]
8. A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics.
Cox J; Matic I; Hilger M; Nagaraj N; Selbach M; Olsen JV; Mann M
Nat Protoc; 2009; 4(5):698-705. PubMed ID: 19373234
[TBL] [Abstract][Full Text] [Related]
9. Optimized fast and sensitive acquisition methods for shotgun proteomics on a quadrupole orbitrap mass spectrometer.
Kelstrup CD; Young C; Lavallee R; Nielsen ML; Olsen JV
J Proteome Res; 2012 Jun; 11(6):3487-97. PubMed ID: 22537090
[TBL] [Abstract][Full Text] [Related]
10. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification.
Cox J; Mann M
Nat Biotechnol; 2008 Dec; 26(12):1367-72. PubMed ID: 19029910
[TBL] [Abstract][Full Text] [Related]
11. Ultra high resolution linear ion trap Orbitrap mass spectrometer (Orbitrap Elite) facilitates top down LC MS/MS and versatile peptide fragmentation modes.
Michalski A; Damoc E; Lange O; Denisov E; Nolting D; Müller M; Viner R; Schwartz J; Remes P; Belford M; Dunyach JJ; Cox J; Horning S; Mann M; Makarov A
Mol Cell Proteomics; 2012 Mar; 11(3):O111.013698. PubMed ID: 22159718
[TBL] [Abstract][Full Text] [Related]
12. Qualitative and Quantitative Shotgun Proteomics Data Analysis from Data-Dependent Acquisition Mass Spectrometry.
Meyer JG
Methods Mol Biol; 2021; 2259():297-308. PubMed ID: 33687723
[TBL] [Abstract][Full Text] [Related]
13. Analysis of high accuracy, quantitative proteomics data in the MaxQB database.
Schaab C; Geiger T; Stoehr G; Cox J; Mann M
Mol Cell Proteomics; 2012 Mar; 11(3):M111.014068. PubMed ID: 22301388
[TBL] [Abstract][Full Text] [Related]
14. Rapid and deep proteomes by faster sequencing on a benchtop quadrupole ultra-high-field Orbitrap mass spectrometer.
Kelstrup CD; Jersie-Christensen RR; Batth TS; Arrey TN; Kuehn A; Kellmann M; Olsen JV
J Proteome Res; 2014 Dec; 13(12):6187-95. PubMed ID: 25349961
[TBL] [Abstract][Full Text] [Related]
15. The Impact II, a Very High-Resolution Quadrupole Time-of-Flight Instrument (QTOF) for Deep Shotgun Proteomics.
Beck S; Michalski A; Raether O; Lubeck M; Kaspar S; Goedecke N; Baessmann C; Hornburg D; Meier F; Paron I; Kulak NA; Cox J; Mann M
Mol Cell Proteomics; 2015 Jul; 14(7):2014-29. PubMed ID: 25991688
[TBL] [Abstract][Full Text] [Related]
16. Exploring the precursor ion exclusion feature of liquid chromatography-electrospray ionization quadrupole time-of-flight mass spectrometry for improving protein identification in shotgun proteome analysis.
Wang N; Li L
Anal Chem; 2008 Jun; 80(12):4696-710. PubMed ID: 18479145
[TBL] [Abstract][Full Text] [Related]
17. UNiquant, a program for quantitative proteomics analysis using stable isotope labeling.
Huang X; Tolmachev AV; Shen Y; Liu M; Huang L; Zhang Z; Anderson GA; Smith RD; Chan WC; Hinrichs SH; Fu K; Ding SJ
J Proteome Res; 2011 Mar; 10(3):1228-37. PubMed ID: 21158445
[TBL] [Abstract][Full Text] [Related]
18. Full-Featured, Real-Time Database Searching Platform Enables Fast and Accurate Multiplexed Quantitative Proteomics.
Schweppe DK; Eng JK; Yu Q; Bailey D; Rad R; Navarrete-Perea J; Huttlin EL; Erickson BK; Paulo JA; Gygi SP
J Proteome Res; 2020 May; 19(5):2026-2034. PubMed ID: 32126768
[TBL] [Abstract][Full Text] [Related]
19. Multiplexed and data-independent tandem mass spectrometry for global proteome profiling.
Chapman JD; Goodlett DR; Masselon CD
Mass Spectrom Rev; 2014; 33(6):452-70. PubMed ID: 24281846
[TBL] [Abstract][Full Text] [Related]
20. Real-Time Search-Assisted Acquisition on a Tribrid Mass Spectrometer Improves Coverage in Multiplexed Single-Cell Proteomics.
Furtwängler B; Üresin N; Motamedchaboki K; Huguet R; Lopez-Ferrer D; Zabrouskov V; Porse BT; Schoof EM
Mol Cell Proteomics; 2022 Apr; 21(4):100219. PubMed ID: 35219906
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
