These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

161 related articles for article (PubMed ID: 22174733)

  • 1. Hyperdimensional analysis of amino acid pair distributions in proteins.
    Henriksen SB; Mortensen RJ; Geertz-Hansen HM; Neves-Petersen MT; Arnason O; Söring J; Petersen SB
    PLoS One; 2011; 6(12):e25638. PubMed ID: 22174733
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Scale-free behaviour of amino acid pair interactions in folded proteins.
    Petersen SB; Neves-Petersen MT; Henriksen SB; Mortensen RJ; Geertz-Hansen HM
    PLoS One; 2012; 7(7):e41322. PubMed ID: 22848462
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Statistical characterization of salt bridges in proteins.
    Sarakatsannis JN; Duan Y
    Proteins; 2005 Sep; 60(4):732-9. PubMed ID: 16021620
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Large-scale prediction of disulphide bridges using kernel methods, two-dimensional recursive neural networks, and weighted graph matching.
    Cheng J; Saigo H; Baldi P
    Proteins; 2006 Mar; 62(3):617-29. PubMed ID: 16320312
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Amino acid pair interchanges at spatially conserved locations.
    Naor D; Fischer D; Jernigan RL; Wolfson HJ; Nussinov R
    J Mol Biol; 1996 Mar; 256(5):924-38. PubMed ID: 8601843
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Searching for patterns of amino acids in 3D protein structures.
    Spriggs RV; Artymiuk PJ; Willett P
    J Chem Inf Comput Sci; 2003; 43(2):412-21. PubMed ID: 12653503
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Amino acid pair- and triplet-wise groupings in the interior of α-helical segments in proteins.
    de Sousa MM; Munteanu CR; Pazos A; Fonseca NA; Camacho R; Magalhães AL
    J Theor Biol; 2011 Feb; 271(1):136-44. PubMed ID: 21130100
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Analysis and prediction of RNA-binding residues using sequence, evolutionary conservation, and predicted secondary structure and solvent accessibility.
    Zhang T; Zhang H; Chen K; Ruan J; Shen S; Kurgan L
    Curr Protein Pept Sci; 2010 Nov; 11(7):609-28. PubMed ID: 20887256
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence.
    Rice DW; Eisenberg D
    J Mol Biol; 1997 Apr; 267(4):1026-38. PubMed ID: 9135128
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Low complexity and disordered regions of proteins have different structural and amino acid preferences.
    Kumari B; Kumar R; Kumar M
    Mol Biosyst; 2015 Feb; 11(2):585-94. PubMed ID: 25468592
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families.
    Thangudu RR; Manoharan M; Srinivasan N; Cadet F; Sowdhamini R; Offmann B
    BMC Struct Biol; 2008 Dec; 8():55. PubMed ID: 19111067
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Discovering structural correlations in alpha-helices.
    Klingler TM; Brutlag DL
    Protein Sci; 1994 Oct; 3(10):1847-57. PubMed ID: 7849600
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Distance distributions in proteins: a six-parameter representation.
    Reese MG; Lund O; Bohr J; Bohr H; Hansen JE; Brunak S
    Protein Eng; 1996 Sep; 9(9):733-40. PubMed ID: 8888138
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Energetics of charge-charge interactions between residues adjacent in sequence.
    Loladze VV; Makhatadze GI
    Proteins; 2011 Dec; 79(12):3494-9. PubMed ID: 22072523
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Amino acid neighbours and detailed conformational analysis of cysteines in proteins.
    Petersen MT; Jonson PH; Petersen SB
    Protein Eng; 1999 Jul; 12(7):535-48. PubMed ID: 10436079
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Amino acid pairing preferences in parallel beta-sheets in proteins.
    Fooks HM; Martin AC; Woolfson DN; Sessions RB; Hutchinson EG
    J Mol Biol; 2006 Feb; 356(1):32-44. PubMed ID: 16337654
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Contact pair dynamics during folding of two small proteins: chicken villin head piece and the Alzheimer protein beta-amyloid.
    Mukherjee A; Bagchi B
    J Chem Phys; 2004 Jan; 120(3):1602-12. PubMed ID: 15268287
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The occurrence of C--H...O hydrogen bonds in alpha-helices and helix termini in globular proteins.
    Manikandan K; Ramakumar S
    Proteins; 2004 Sep; 56(4):768-81. PubMed ID: 15281129
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Structure motif discovery and mining the PDB.
    Jonassen I; Eidhammer I; Conklin D; Taylor WR
    Bioinformatics; 2002 Feb; 18(2):362-7. PubMed ID: 11847094
    [TBL] [Abstract][Full Text] [Related]  

  • 20. NIAS-Server: Neighbors Influence of Amino acids and Secondary Structures in Proteins.
    Borguesan B; Inostroza-Ponta M; Dorn M
    J Comput Biol; 2017 Mar; 24(3):255-265. PubMed ID: 27494258
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.