These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

224 related articles for article (PubMed ID: 22190732)

  • 1. Protein significance analysis in selected reaction monitoring (SRM) measurements.
    Chang CY; Picotti P; Hüttenhain R; Heinzelmann-Schwarz V; Jovanovic M; Aebersold R; Vitek O
    Mol Cell Proteomics; 2012 Apr; 11(4):M111.014662. PubMed ID: 22190732
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Automated selected reaction monitoring data analysis workflow for large-scale targeted proteomic studies.
    Surinova S; Hüttenhain R; Chang CY; Espona L; Vitek O; Aebersold R
    Nat Protoc; 2013 Aug; 8(8):1602-19. PubMed ID: 23887179
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A Targeted Mass Spectrometry Strategy for Developing Proteomic Biomarkers: A Case Study of Epithelial Ovarian Cancer.
    Hüttenhain R; Choi M; Martin de la Fuente L; Oehl K; Chang CY; Zimmermann AK; Malander S; Olsson H; Surinova S; Clough T; Heinzelmann-Schwarz V; Wild PJ; Dinulescu DM; Niméus E; Vitek O; Aebersold R
    Mol Cell Proteomics; 2019 Sep; 18(9):1836-1850. PubMed ID: 31289117
    [TBL] [Abstract][Full Text] [Related]  

  • 4. ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry.
    Brusniak MY; Kwok ST; Christiansen M; Campbell D; Reiter L; Picotti P; Kusebauch U; Ramos H; Deutsch EW; Chen J; Moritz RL; Aebersold R
    BMC Bioinformatics; 2011 Mar; 12():78. PubMed ID: 21414234
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A computational tool to detect and avoid redundancy in selected reaction monitoring.
    Röst H; Malmström L; Aebersold R
    Mol Cell Proteomics; 2012 Aug; 11(8):540-9. PubMed ID: 22535207
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments.
    Tsai TH; Choi M; Banfai B; Liu Y; MacLean BX; Dunkley T; Vitek O
    Mol Cell Proteomics; 2020 Jun; 19(6):944-959. PubMed ID: 32234965
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Reproducibility of combinatorial peptide ligand libraries for proteome capture evaluated by selected reaction monitoring.
    Di Girolamo F; Righetti PG; Soste M; Feng Y; Picotti P
    J Proteomics; 2013 Aug; 89():215-26. PubMed ID: 23747450
    [TBL] [Abstract][Full Text] [Related]  

  • 8. CoreFlow: a computational platform for integration, analysis and modeling of complex biological data.
    Pasculescu A; Schoof EM; Creixell P; Zheng Y; Olhovsky M; Tian R; So J; Vanderlaan RD; Pawson T; Linding R; Colwill K
    J Proteomics; 2014 Apr; 100():167-73. PubMed ID: 24503186
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics.
    Picotti P; Bodenmiller B; Mueller LN; Domon B; Aebersold R
    Cell; 2009 Aug; 138(4):795-806. PubMed ID: 19664813
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MSstatsQC: Longitudinal System Suitability Monitoring and Quality Control for Targeted Proteomic Experiments.
    Dogu E; Mohammad-Taheri S; Abbatiello SE; Bereman MS; MacLean B; Schilling B; Vitek O
    Mol Cell Proteomics; 2017 Jul; 16(7):1335-1347. PubMed ID: 28483925
    [TBL] [Abstract][Full Text] [Related]  

  • 11. In silico design of targeted SRM-based experiments.
    Nahnsen S; Kohlbacher O
    BMC Bioinformatics; 2012; 13 Suppl 16(Suppl 16):S8. PubMed ID: 23176520
    [TBL] [Abstract][Full Text] [Related]  

  • 12. In-depth proteomics of ovarian cancer ascites: combining shotgun proteomics and selected reaction monitoring mass spectrometry.
    Elschenbroich S; Ignatchenko V; Clarke B; Kalloger SE; Boutros PC; Gramolini AO; Shaw P; Jurisica I; Kislinger T
    J Proteome Res; 2011 May; 10(5):2286-99. PubMed ID: 21491939
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Peptides quantification by liquid chromatography with matrix-assisted laser desorption/ionization and selected reaction monitoring detection.
    Lesur A; Varesio E; Domon B; Hopfgartner G
    J Proteome Res; 2012 Oct; 11(10):4972-82. PubMed ID: 22897511
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Experimental design and data-analysis in label-free quantitative LC/MS proteomics: A tutorial with MSqRob.
    Goeminne LJE; Gevaert K; Clement L
    J Proteomics; 2018 Jan; 171():23-36. PubMed ID: 28391044
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Rapidly Assessing the Quality of Targeted Proteomics Experiments through Monitoring Stable-Isotope Labeled Standards.
    Gibbons BC; Fillmore TL; Gao Y; Moore RJ; Liu T; Nakayasu ES; Metz TO; Payne SH
    J Proteome Res; 2019 Feb; 18(2):694-699. PubMed ID: 30525668
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.
    Brusniak MY; Bodenmiller B; Campbell D; Cooke K; Eddes J; Garbutt A; Lau H; Letarte S; Mueller LN; Sharma V; Vitek O; Zhang N; Aebersold R; Watts JD
    BMC Bioinformatics; 2008 Dec; 9():542. PubMed ID: 19087345
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Enhanced sensitivity for selected reaction monitoring mass spectrometry-based targeted proteomics using a dual stage electrodynamic ion funnel interface.
    Hossain M; Kaleta DT; Robinson EW; Liu T; Zhao R; Page JS; Kelly RT; Moore RJ; Tang K; Camp DG; Qian WJ; Smith RD
    Mol Cell Proteomics; 2011 Feb; 10(2):M000062-MCP201. PubMed ID: 20410378
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Selected Reaction Monitoring to Measure Proteins of Interest in Complex Samples: A Practical Guide.
    Feng Y; Picotti P
    Methods Mol Biol; 2016; 1394():43-56. PubMed ID: 26700040
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Two-dimensional peptide separation improving sensitivity of selected reaction monitoring-based quantitative proteomics in mouse liver tissue: comparing off-gel electrophoresis and strong cation exchange chromatography.
    Schäfer A; von Toerne C; Becker S; Sarioglu H; Neschen S; Kahle M; Hauck SM; Ueffing M
    Anal Chem; 2012 Oct; 84(20):8853-62. PubMed ID: 22994301
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Targeted proteomic quantification on quadrupole-orbitrap mass spectrometer.
    Gallien S; Duriez E; Crone C; Kellmann M; Moehring T; Domon B
    Mol Cell Proteomics; 2012 Dec; 11(12):1709-23. PubMed ID: 22962056
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.