191 related articles for article (PubMed ID: 22200485)
1. Role of the coiled-coil tip of Escherichia coli DksA in promoter control.
Lee JH; Lennon CW; Ross W; Gourse RL
J Mol Biol; 2012 Mar; 416(4):503-17. PubMed ID: 22200485
[TBL] [Abstract][Full Text] [Related]
2. Effects of DksA, GreA, and GreB on transcription initiation: insights into the mechanisms of factors that bind in the secondary channel of RNA polymerase.
Rutherford ST; Lemke JJ; Vrentas CE; Gaal T; Ross W; Gourse RL
J Mol Biol; 2007 Mar; 366(4):1243-57. PubMed ID: 17207814
[TBL] [Abstract][Full Text] [Related]
3. Direct interactions between the coiled-coil tip of DksA and the trigger loop of RNA polymerase mediate transcriptional regulation.
Lennon CW; Ross W; Martin-Tumasz S; Toulokhonov I; Vrentas CE; Rutherford ST; Lee JH; Butcher SE; Gourse RL
Genes Dev; 2012 Dec; 26(23):2634-46. PubMed ID: 23207918
[TBL] [Abstract][Full Text] [Related]
4. Antagonistic regulation of Escherichia coli ribosomal RNA rrnB P1 promoter activity by GreA and DksA.
Potrykus K; Vinella D; Murphy H; Szalewska-Palasz A; D'Ari R; Cashel M
J Biol Chem; 2006 Jun; 281(22):15238-48. PubMed ID: 16597620
[TBL] [Abstract][Full Text] [Related]
5. Regulation through the secondary channel--structural framework for ppGpp-DksA synergism during transcription.
Perederina A; Svetlov V; Vassylyeva MN; Tahirov TH; Yokoyama S; Artsimovitch I; Vassylyev DG
Cell; 2004 Aug; 118(3):297-309. PubMed ID: 15294156
[TBL] [Abstract][Full Text] [Related]
6. An insertion in the catalytic trigger loop gates the secondary channel of RNA polymerase.
Furman R; Tsodikov OV; Wolf YI; Artsimovitch I
J Mol Biol; 2013 Jan; 425(1):82-93. PubMed ID: 23147217
[TBL] [Abstract][Full Text] [Related]
7. Effects on growth by changes of the balance between GreA, GreB, and DksA suggest mutual competition and functional redundancy in Escherichia coli.
Vinella D; Potrykus K; Murphy H; Cashel M
J Bacteriol; 2012 Jan; 194(2):261-73. PubMed ID: 22056927
[TBL] [Abstract][Full Text] [Related]
8. TraR directly regulates transcription initiation by mimicking the combined effects of the global regulators DksA and ppGpp.
Gopalkrishnan S; Ross W; Chen AY; Gourse RL
Proc Natl Acad Sci U S A; 2017 Jul; 114(28):E5539-E5548. PubMed ID: 28652326
[TBL] [Abstract][Full Text] [Related]
9. Characterization of a novel RNA polymerase mutant that alters DksA activity.
Satory D; Halliday JA; Sivaramakrishnan P; Lua RC; Herman C
J Bacteriol; 2013 Sep; 195(18):4187-94. PubMed ID: 23852871
[TBL] [Abstract][Full Text] [Related]
10. Transcription initiation factor DksA has diverse effects on RNA chain elongation.
Furman R; Sevostyanova A; Artsimovitch I
Nucleic Acids Res; 2012 Apr; 40(8):3392-402. PubMed ID: 22210857
[TBL] [Abstract][Full Text] [Related]
11. Mutational analysis of Escherichia coli GreA protein reveals new functional activity independent of antipause and lethal when overexpressed.
Fernández-Coll L; Potrykus K; Cashel M; Balsalobre C
Sci Rep; 2020 Sep; 10(1):16074. PubMed ID: 32999370
[TBL] [Abstract][Full Text] [Related]
12. The carboxy-terminal coiled-coil of the RNA polymerase beta'-subunit is the main binding site for Gre factors.
Vassylyeva MN; Svetlov V; Dearborn AD; Klyuyev S; Artsimovitch I; Vassylyev DG
EMBO Rep; 2007 Nov; 8(11):1038-43. PubMed ID: 17917675
[TBL] [Abstract][Full Text] [Related]
13. TraR, a homolog of a RNAP secondary channel interactor, modulates transcription.
Blankschien MD; Potrykus K; Grace E; Choudhary A; Vinella D; Cashel M; Herman C
PLoS Genet; 2009 Jan; 5(1):e1000345. PubMed ID: 19148274
[TBL] [Abstract][Full Text] [Related]
14. Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase.
Laptenko O; Lee J; Lomakin I; Borukhov S
EMBO J; 2003 Dec; 22(23):6322-34. PubMed ID: 14633991
[TBL] [Abstract][Full Text] [Related]
15. Crystal structure of Escherichia coli Rnk, a new RNA polymerase-interacting protein.
Lamour V; Rutherford ST; Kuznedelov K; Ramagopal UA; Gourse RL; Severinov K; Darst SA
J Mol Biol; 2008 Nov; 383(2):367-79. PubMed ID: 18760284
[TBL] [Abstract][Full Text] [Related]
16. Allosteric control of Escherichia coli rRNA promoter complexes by DksA.
Rutherford ST; Villers CL; Lee JH; Ross W; Gourse RL
Genes Dev; 2009 Jan; 23(2):236-48. PubMed ID: 19171784
[TBL] [Abstract][Full Text] [Related]
17. The dual role of DksA protein in the regulation of Escherichia coli pArgX promoter.
Łyżeń R; Maitra A; Milewska K; Kochanowska-Łyżeń M; Hernandez VJ; Szalewska-Pałasz A
Nucleic Acids Res; 2016 Dec; 44(21):10316-10325. PubMed ID: 27915292
[TBL] [Abstract][Full Text] [Related]
18. A proximal promoter element required for positive transcriptional control by guanosine tetraphosphate and DksA protein during the stringent response.
Gummesson B; Lovmar M; Nyström T
J Biol Chem; 2013 Jul; 288(29):21055-21064. PubMed ID: 23749992
[TBL] [Abstract][Full Text] [Related]
19. Super DksAs: substitutions in DksA enhancing its effects on transcription initiation.
Blankschien MD; Lee JH; Grace ED; Lennon CW; Halliday JA; Ross W; Gourse RL; Herman C
EMBO J; 2009 Jun; 28(12):1720-31. PubMed ID: 19424178
[TBL] [Abstract][Full Text] [Related]
20. DksA-RNA polymerase interactions support new origin formation and DNA repair in Escherichia coli.
Myka KK; Küsters K; Washburn R; Gottesman ME
Mol Microbiol; 2019 May; 111(5):1382-1397. PubMed ID: 30779388
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
