These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

126 related articles for article (PubMed ID: 22207618)

  • 1. Genome-wide metabolic network reconstruction of the picoalga Ostreococcus.
    Krumholz EW; Yang H; Weisenhorn P; Henry CS; Libourel IG
    J Exp Bot; 2012 Mar; 63(6):2353-62. PubMed ID: 22207618
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Toward the automated generation of genome-scale metabolic networks in the SEED.
    DeJongh M; Formsma K; Boillot P; Gould J; Rycenga M; Best A
    BMC Bioinformatics; 2007 Apr; 8():139. PubMed ID: 17462086
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Automated genome annotation and metabolic model reconstruction in the SEED and Model SEED.
    Devoid S; Overbeek R; DeJongh M; Vonstein V; Best AA; Henry C
    Methods Mol Biol; 2013; 985():17-45. PubMed ID: 23417797
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks.
    Stelzer M; Sun J; Kamphans T; Fekete SP; Zeng AP
    Integr Biol (Camb); 2011 Nov; 3(11):1071-86. PubMed ID: 21952610
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sequence-based Network Completion Reveals the Integrality of Missing Reactions in Metabolic Networks.
    Krumholz EW; Libourel IG
    J Biol Chem; 2015 Jul; 290(31):19197-207. PubMed ID: 26041773
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies.
    Blanc-Mathieu R; Verhelst B; Derelle E; Rombauts S; Bouget FY; Carré I; Château A; Eyre-Walker A; Grimsley N; Moreau H; Piégu B; Rivals E; Schackwitz W; Van de Peer Y; Piganeau G
    BMC Genomics; 2014 Dec; 15(1):1103. PubMed ID: 25494611
    [TBL] [Abstract][Full Text] [Related]  

  • 7. New insights into the nature and phylogeny of prasinophyte antenna proteins: Ostreococcus tauri, a case study.
    Six C; Worden AZ; Rodríguez F; Moreau H; Partensky F
    Mol Biol Evol; 2005 Nov; 22(11):2217-30. PubMed ID: 16049197
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Systems-level feedback regulation of cell cycle transitions in Ostreococcus tauri.
    Kapuy O; Vinod PK; Bánhegyi G; Novák B
    Plant Physiol Biochem; 2018 May; 126():39-46. PubMed ID: 29499434
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Ostreococcus tauri is a new model green alga for studying iron metabolism in eukaryotic phytoplankton.
    Lelandais G; Scheiber I; Paz-Yepes J; Lozano JC; Botebol H; Pilátová J; Žárský V; Léger T; Blaiseau PL; Bowler C; Bouget FY; Camadro JM; Sutak R; Lesuisse E
    BMC Genomics; 2016 May; 17():319. PubMed ID: 27142620
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Genome-scale metabolic models: reconstruction and analysis.
    Baart GJ; Martens DE
    Methods Mol Biol; 2012; 799():107-26. PubMed ID: 21993642
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Glycerolipid Characterization and Nutrient Deprivation-Associated Changes in the Green Picoalga
    Degraeve-Guilbault C; Bréhélin C; Haslam R; Sayanova O; Marie-Luce G; Jouhet J; Corellou F
    Plant Physiol; 2017 Apr; 173(4):2060-2080. PubMed ID: 28235892
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Diversity of Viruses Infecting the Green Microalga Ostreococcus lucimarinus.
    Derelle E; Monier A; Cooke R; Worden AZ; Grimsley NH; Moreau H
    J Virol; 2015 Jun; 89(11):5812-21. PubMed ID: 25787287
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Unique regulation of the Calvin cycle in the ultrasmall green alga Ostreococcus.
    Robbens S; Petersen J; Brinkmann H; Rouzé P; Van de Peer Y
    J Mol Evol; 2007 May; 64(5):601-4. PubMed ID: 17457634
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The complete chloroplast and mitochondrial DNA sequence of Ostreococcus tauri: organelle genomes of the smallest eukaryote are examples of compaction.
    Robbens S; Derelle E; Ferraz C; Wuyts J; Moreau H; Van de Peer Y
    Mol Biol Evol; 2007 Apr; 24(4):956-68. PubMed ID: 17251180
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Characterization of a nitric oxide synthase from the plant kingdom: NO generation from the green alga Ostreococcus tauri is light irradiance and growth phase dependent.
    Foresi N; Correa-Aragunde N; Parisi G; Caló G; Salerno G; Lamattina L
    Plant Cell; 2010 Nov; 22(11):3816-30. PubMed ID: 21119059
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Zea mays iRS1563: a comprehensive genome-scale metabolic reconstruction of maize metabolism.
    Saha R; Suthers PF; Maranas CD
    PLoS One; 2011; 6(7):e21784. PubMed ID: 21755001
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Computational reconstruction of metabolic networks from KEGG.
    Zhou T
    Methods Mol Biol; 2013; 930():235-49. PubMed ID: 23086844
    [TBL] [Abstract][Full Text] [Related]  

  • 18. High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource.
    Seaver SM; Gerdes S; Frelin O; Lerma-Ortiz C; Bradbury LM; Zallot R; Hasnain G; Niehaus TD; El Yacoubi B; Pasternak S; Olson R; Pusch G; Overbeek R; Stevens R; de Crécy-Lagard V; Ware D; Hanson AD; Henry CS
    Proc Natl Acad Sci U S A; 2014 Jul; 111(26):9645-50. PubMed ID: 24927599
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Unravelling cis-regulatory elements in the genome of the smallest photosynthetic eukaryote: phylogenetic footprinting in Ostreococcus.
    Piganeau G; Vandepoele K; Gourbière S; Van de Peer Y; Moreau H
    J Mol Evol; 2009 Sep; 69(3):249-59. PubMed ID: 19693423
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Automated generation of genome-scale metabolic draft reconstructions based on KEGG.
    Karlsen E; Schulz C; Almaas E
    BMC Bioinformatics; 2018 Dec; 19(1):467. PubMed ID: 30514205
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.