BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

128 related articles for article (PubMed ID: 22207618)

  • 1. Genome-wide metabolic network reconstruction of the picoalga Ostreococcus.
    Krumholz EW; Yang H; Weisenhorn P; Henry CS; Libourel IG
    J Exp Bot; 2012 Mar; 63(6):2353-62. PubMed ID: 22207618
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Toward the automated generation of genome-scale metabolic networks in the SEED.
    DeJongh M; Formsma K; Boillot P; Gould J; Rycenga M; Best A
    BMC Bioinformatics; 2007 Apr; 8():139. PubMed ID: 17462086
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Automated genome annotation and metabolic model reconstruction in the SEED and Model SEED.
    Devoid S; Overbeek R; DeJongh M; Vonstein V; Best AA; Henry C
    Methods Mol Biol; 2013; 985():17-45. PubMed ID: 23417797
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks.
    Stelzer M; Sun J; Kamphans T; Fekete SP; Zeng AP
    Integr Biol (Camb); 2011 Nov; 3(11):1071-86. PubMed ID: 21952610
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sequence-based Network Completion Reveals the Integrality of Missing Reactions in Metabolic Networks.
    Krumholz EW; Libourel IG
    J Biol Chem; 2015 Jul; 290(31):19197-207. PubMed ID: 26041773
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies.
    Blanc-Mathieu R; Verhelst B; Derelle E; Rombauts S; Bouget FY; Carré I; Château A; Eyre-Walker A; Grimsley N; Moreau H; Piégu B; Rivals E; Schackwitz W; Van de Peer Y; Piganeau G
    BMC Genomics; 2014 Dec; 15(1):1103. PubMed ID: 25494611
    [TBL] [Abstract][Full Text] [Related]  

  • 7. New insights into the nature and phylogeny of prasinophyte antenna proteins: Ostreococcus tauri, a case study.
    Six C; Worden AZ; Rodríguez F; Moreau H; Partensky F
    Mol Biol Evol; 2005 Nov; 22(11):2217-30. PubMed ID: 16049197
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Systems-level feedback regulation of cell cycle transitions in Ostreococcus tauri.
    Kapuy O; Vinod PK; Bánhegyi G; Novák B
    Plant Physiol Biochem; 2018 May; 126():39-46. PubMed ID: 29499434
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Ostreococcus tauri is a new model green alga for studying iron metabolism in eukaryotic phytoplankton.
    Lelandais G; Scheiber I; Paz-Yepes J; Lozano JC; Botebol H; Pilátová J; Žárský V; Léger T; Blaiseau PL; Bowler C; Bouget FY; Camadro JM; Sutak R; Lesuisse E
    BMC Genomics; 2016 May; 17():319. PubMed ID: 27142620
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Genome-scale metabolic models: reconstruction and analysis.
    Baart GJ; Martens DE
    Methods Mol Biol; 2012; 799():107-26. PubMed ID: 21993642
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Glycerolipid Characterization and Nutrient Deprivation-Associated Changes in the Green Picoalga
    Degraeve-Guilbault C; Bréhélin C; Haslam R; Sayanova O; Marie-Luce G; Jouhet J; Corellou F
    Plant Physiol; 2017 Apr; 173(4):2060-2080. PubMed ID: 28235892
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Diversity of Viruses Infecting the Green Microalga Ostreococcus lucimarinus.
    Derelle E; Monier A; Cooke R; Worden AZ; Grimsley NH; Moreau H
    J Virol; 2015 Jun; 89(11):5812-21. PubMed ID: 25787287
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Unique regulation of the Calvin cycle in the ultrasmall green alga Ostreococcus.
    Robbens S; Petersen J; Brinkmann H; Rouzé P; Van de Peer Y
    J Mol Evol; 2007 May; 64(5):601-4. PubMed ID: 17457634
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The complete chloroplast and mitochondrial DNA sequence of Ostreococcus tauri: organelle genomes of the smallest eukaryote are examples of compaction.
    Robbens S; Derelle E; Ferraz C; Wuyts J; Moreau H; Van de Peer Y
    Mol Biol Evol; 2007 Apr; 24(4):956-68. PubMed ID: 17251180
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Characterization of a nitric oxide synthase from the plant kingdom: NO generation from the green alga Ostreococcus tauri is light irradiance and growth phase dependent.
    Foresi N; Correa-Aragunde N; Parisi G; Caló G; Salerno G; Lamattina L
    Plant Cell; 2010 Nov; 22(11):3816-30. PubMed ID: 21119059
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Zea mays iRS1563: a comprehensive genome-scale metabolic reconstruction of maize metabolism.
    Saha R; Suthers PF; Maranas CD
    PLoS One; 2011; 6(7):e21784. PubMed ID: 21755001
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Computational reconstruction of metabolic networks from KEGG.
    Zhou T
    Methods Mol Biol; 2013; 930():235-49. PubMed ID: 23086844
    [TBL] [Abstract][Full Text] [Related]  

  • 18. High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource.
    Seaver SM; Gerdes S; Frelin O; Lerma-Ortiz C; Bradbury LM; Zallot R; Hasnain G; Niehaus TD; El Yacoubi B; Pasternak S; Olson R; Pusch G; Overbeek R; Stevens R; de Crécy-Lagard V; Ware D; Hanson AD; Henry CS
    Proc Natl Acad Sci U S A; 2014 Jul; 111(26):9645-50. PubMed ID: 24927599
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Unravelling cis-regulatory elements in the genome of the smallest photosynthetic eukaryote: phylogenetic footprinting in Ostreococcus.
    Piganeau G; Vandepoele K; Gourbière S; Van de Peer Y; Moreau H
    J Mol Evol; 2009 Sep; 69(3):249-59. PubMed ID: 19693423
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Automated generation of genome-scale metabolic draft reconstructions based on KEGG.
    Karlsen E; Schulz C; Almaas E
    BMC Bioinformatics; 2018 Dec; 19(1):467. PubMed ID: 30514205
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.