218 related articles for article (PubMed ID: 22210888)
1. A rapid assay for affinity and kinetics of molecular interactions with nucleic acids.
Donaldson GP; Roelofs KG; Luo Y; Sintim HO; Lee VT
Nucleic Acids Res; 2012 Apr; 40(7):e48. PubMed ID: 22210888
[TBL] [Abstract][Full Text] [Related]
2. Differential Radial Capillary Action of Ligand Assay (DRaCALA).
Seminara AB; Turdiev A; Turdiev H; Lee VT
Curr Protoc Mol Biol; 2019 Apr; 126(1):e84. PubMed ID: 30508276
[TBL] [Abstract][Full Text] [Related]
3. Differential radial capillary action of ligand assay for high-throughput detection of protein-metabolite interactions.
Roelofs KG; Wang J; Sintim HO; Lee VT
Proc Natl Acad Sci U S A; 2011 Sep; 108(37):15528-33. PubMed ID: 21876132
[TBL] [Abstract][Full Text] [Related]
4. Assessing RNA interactions with proteins by DRaCALA.
Patel DK; Gebbie MP; Lee VT
Methods Enzymol; 2014; 549():489-512. PubMed ID: 25432762
[TBL] [Abstract][Full Text] [Related]
5. Interactions of the c-di-GMP riboswitch with its second messenger ligand.
Smith KD; Strobel SA
Biochem Soc Trans; 2011 Apr; 39(2):647-51. PubMed ID: 21428955
[TBL] [Abstract][Full Text] [Related]
6. Communications between the high-affinity cyclic nucleotide binding sites in E. coli cyclic AMP receptor protein: effect of single site mutations.
Lin SH; Lee JC
Biochemistry; 2002 Oct; 41(39):11857-67. PubMed ID: 12269830
[TBL] [Abstract][Full Text] [Related]
7. An equilibrium study of the cooperative binding of adenosine cyclic 3',5'-monophosphate and guanosine cyclic 3',5'-monophosphate to the adenosine cyclic 3',5'-monophosphate receptor protein from Escherichia coli.
Takahashi M; Blazy B; Baudras A
Biochemistry; 1980 Oct; 19(22):5124-30. PubMed ID: 6257276
[TBL] [Abstract][Full Text] [Related]
8. Differential Radial Capillary Action of Ligand Assay (DRaCALA) for High-Throughput Detection of Protein-Metabolite Interactions in Bacteria.
Orr MW; Lee VT
Methods Mol Biol; 2017; 1535():25-41. PubMed ID: 27914071
[TBL] [Abstract][Full Text] [Related]
9. A mass spectrometry-based non-radioactive differential radial capillary action of ligand assay (DRaCALA) to assess ligand binding to proteins.
Cimdins-Ahne A; Chernobrovkin A; Kim SK; Lee VT; Zubarev RA; Römling U
J Mass Spectrom; 2022 Mar; 57(4):e4822. PubMed ID: 35362254
[TBL] [Abstract][Full Text] [Related]
10. Structural basis of differential ligand recognition by two classes of bis-(3'-5')-cyclic dimeric guanosine monophosphate-binding riboswitches.
Smith KD; Shanahan CA; Moore EL; Simon AC; Strobel SA
Proc Natl Acad Sci U S A; 2011 May; 108(19):7757-62. PubMed ID: 21518891
[TBL] [Abstract][Full Text] [Related]
11. The cyclic AMP (cAMP)-cAMP receptor protein complex functions both as an activator and as a corepressor at the tsx-p2 promoter of Escherichia coli K-12.
Gerlach P; Søgaard-Andersen L; Pedersen H; Martinussen J; Valentin-Hansen P; Bremer E
J Bacteriol; 1991 Sep; 173(17):5419-30. PubMed ID: 1715855
[TBL] [Abstract][Full Text] [Related]
12. Identification and characterization of RNA binding sites for (p)ppGpp using RNA-DRaCALA.
Jagodnik J; Tjaden B; Ross W; Gourse RL
Nucleic Acids Res; 2023 Jan; 51(2):852-869. PubMed ID: 36617997
[TBL] [Abstract][Full Text] [Related]
13. Identifying the Binding Proteins of Small Ligands with the Differential Radial Capillary Action of Ligand Assay (DRaCALA).
Schicketanz ML; Długosz P; Zhang YE
J Vis Exp; 2021 Mar; (169):. PubMed ID: 33818559
[TBL] [Abstract][Full Text] [Related]
14. Systematic Identification of Cyclic-di-GMP Binding Proteins in Vibrio cholerae Reveals a Novel Class of Cyclic-di-GMP-Binding ATPases Associated with Type II Secretion Systems.
Roelofs KG; Jones CJ; Helman SR; Shang X; Orr MW; Goodson JR; Galperin MY; Yildiz FH; Lee VT
PLoS Pathog; 2015 Oct; 11(10):e1005232. PubMed ID: 26506097
[TBL] [Abstract][Full Text] [Related]
15. 19F-n.m.r. studies of ligand binding to 5-fluorotryptophan- and 3-fluorotyrosine-containing cyclic AMP receptor protein from Escherichia coli.
Sixl F; King RW; Bracken M; Feeney J
Biochem J; 1990 Mar; 266(2):545-52. PubMed ID: 2156500
[TBL] [Abstract][Full Text] [Related]
16. Ligand-modulated binding of a gene regulatory protein to DNA. Quantitative analysis of cyclic-AMP induced binding of CRP from Escherichia coli to non-specific and specific DNA targets.
Takahashi M; Blazy B; Baudras A; Hillen W
J Mol Biol; 1989 Jun; 207(4):783-96. PubMed ID: 2547972
[TBL] [Abstract][Full Text] [Related]
17. Functional roles of loops 3 and 4 in the cyclic nucleotide binding domain of cyclic AMP receptor protein from Escherichia coli.
Chen R; Lee JC
J Biol Chem; 2003 Apr; 278(15):13235-43. PubMed ID: 12551924
[TBL] [Abstract][Full Text] [Related]
18. Molecular dynamics simulation on the allosteric analysis of the c-di-GMP class I riboswitch induced by ligand binding.
Li C; Zhao X; Xie P; Hu J; Bi H
J Mol Recognit; 2019 Jan; 32(1):e2756. PubMed ID: 30033590
[TBL] [Abstract][Full Text] [Related]
19. Differential binding of 2'-biotinylated analogs of c-di-GMP with c-di-GMP riboswitches and binding proteins.
Luo Y; Zhou J; Watt SK; Lee VT; Dayie TK; Sintim HO
Mol Biosyst; 2012 Mar; 8(3):772-8. PubMed ID: 22182995
[TBL] [Abstract][Full Text] [Related]
20. Fluorescence quenching studies of conformational changes induced by cAMP and DNA binding to heterodimer of cyclic AMP receptor protein from Escherichia coli.
Fic E; Górecki A; Wasylewski Z
Protein J; 2007 Oct; 26(7):457-66. PubMed ID: 17505875
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]