113 related articles for article (PubMed ID: 22219205)
1. Automatic selection of reference taxa for protein-protein interaction prediction with phylogenetic profiling.
Simonsen M; Maetschke SR; Ragan MA
Bioinformatics; 2012 Mar; 28(6):851-7. PubMed ID: 22219205
[TBL] [Abstract][Full Text] [Related]
2. Phylogeny of metabolic networks: a spectral graph theoretical approach.
Deyasi K; Banerjee A; Deb B
J Biosci; 2015 Oct; 40(4):799-808. PubMed ID: 26564980
[TBL] [Abstract][Full Text] [Related]
3. The chimeric origin of the cardiolipin biosynthetic pathway in the Eukarya domain.
Luévano-Martínez LA
Biochim Biophys Acta; 2015; 1847(6-7):599-606. PubMed ID: 25843551
[TBL] [Abstract][Full Text] [Related]
4. Archaeal phylogenomics provides evidence in support of a methanogenic origin of the Archaea and a thaumarchaeal origin for the eukaryotes.
Kelly S; Wickstead B; Gull K
Proc Biol Sci; 2011 Apr; 278(1708):1009-18. PubMed ID: 20880885
[TBL] [Abstract][Full Text] [Related]
5. Rooted phylogeny of the three superkingdoms.
Harish A; Tunlid A; Kurland CG
Biochimie; 2013 Aug; 95(8):1593-604. PubMed ID: 23669449
[TBL] [Abstract][Full Text] [Related]
6. Evolutionary Relationships and Taxa-Specific Conserved Signature Indels Among Cellulases of Archaea, Bacteria, and Eukarya.
Thomas L; Ram H; Singh VP
J Comput Biol; 2017 Oct; 24(10):1029-1042. PubMed ID: 28177649
[TBL] [Abstract][Full Text] [Related]
7. Comparative analyses of whole-genome protein sequences from multiple organisms.
Yokono M; Satoh S; Tanaka A
Sci Rep; 2018 May; 8(1):6800. PubMed ID: 29717164
[TBL] [Abstract][Full Text] [Related]
8. Evolution and phyletic distribution of two-component signal transduction systems.
Wuichet K; Cantwell BJ; Zhulin IB
Curr Opin Microbiol; 2010 Apr; 13(2):219-25. PubMed ID: 20133179
[TBL] [Abstract][Full Text] [Related]
9. Release LTPs104 of the All-Species Living Tree.
Munoz R; Yarza P; Ludwig W; Euzéby J; Amann R; Schleifer KH; Glöckner FO; Rosselló-Móra R
Syst Appl Microbiol; 2011 May; 34(3):169-70. PubMed ID: 21497273
[No Abstract] [Full Text] [Related]
10. Mapping the tree of life: progress and prospects.
Pace NR
Microbiol Mol Biol Rev; 2009 Dec; 73(4):565-76. PubMed ID: 19946133
[TBL] [Abstract][Full Text] [Related]
11. "Phylogenetic and evolutionary analysis of functional divergence among Gamma glutamyl transpeptidase (GGT) subfamilies".
Verma VV; Gupta R; Goel M
Biol Direct; 2015 Sep; 10():49. PubMed ID: 26370226
[TBL] [Abstract][Full Text] [Related]
12. A new view of the tree of life.
Hug LA; Baker BJ; Anantharaman K; Brown CT; Probst AJ; Castelle CJ; Butterfield CN; Hernsdorf AW; Amano Y; Ise K; Suzuki Y; Dudek N; Relman DA; Finstad KM; Amundson R; Thomas BC; Banfield JF
Nat Microbiol; 2016 Apr; 1():16048. PubMed ID: 27572647
[TBL] [Abstract][Full Text] [Related]
13. Quantifying MCMC exploration of phylogenetic tree space.
Whidden C; Matsen FA
Syst Biol; 2015 May; 64(3):472-91. PubMed ID: 25631175
[TBL] [Abstract][Full Text] [Related]
14. Combining phylogenetic profiling-based and machine learning-based techniques to predict functional related proteins.
Lin TW; Wu JW; Chang DT
PLoS One; 2013; 8(9):e75940. PubMed ID: 24069454
[TBL] [Abstract][Full Text] [Related]
15. Studying AMPK in an Evolutionary Context.
Jain A; Roustan V; Weckwerth W; Ebersberger I
Methods Mol Biol; 2018; 1732():111-142. PubMed ID: 29480472
[TBL] [Abstract][Full Text] [Related]
16. Composition vector approach to whole-genome-based prokaryotic phylogeny: success and foundations.
Li Q; Xu Z; Hao B
J Biotechnol; 2010 Sep; 149(3):115-9. PubMed ID: 20036699
[TBL] [Abstract][Full Text] [Related]
17. The effects of model choice and mitigating bias on the ribosomal tree of life.
Lasek-Nesselquist E; Gogarten JP
Mol Phylogenet Evol; 2013 Oct; 69(1):17-38. PubMed ID: 23707703
[TBL] [Abstract][Full Text] [Related]
18. Archaea.
Eme L; Doolittle WF
Curr Biol; 2015 Oct; 25(19):R851-5. PubMed ID: 26439345
[TBL] [Abstract][Full Text] [Related]
19. Reshaping the tree of life.
Heinz E; Domman D
Nat Rev Microbiol; 2017 May; 15(6):322. PubMed ID: 28496163
[TBL] [Abstract][Full Text] [Related]
20. Genome-wide comparison of ferritin family from Archaea, Bacteria, Eukarya, and Viruses: its distribution, characteristic motif, and phylogenetic relationship.
Bai L; Xie T; Hu Q; Deng C; Zheng R; Chen W
Naturwissenschaften; 2015 Oct; 102(9-10):64. PubMed ID: 26411976
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
