BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

69 related articles for article (PubMed ID: 22253694)

  • 1. Reverse engineering directed gene regulatory networks from transcriptomics and proteomics data of biomining bacterial communities with approximate Bayesian computation and steady-state signalling simulations.
    Buetti-Dinh A; Herold M; Christel S; El Hajjami M; Delogu F; Ilie O; Bellenberg S; Wilmes P; Poetsch A; Sand W; Vera M; Pivkin IV; Friedman R; Dopson M
    BMC Bioinformatics; 2020 Jan; 21(1):23. PubMed ID: 31964336
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identifying gene regulatory network rewiring using latent differential graphical models.
    Tian D; Gu Q; Ma J
    Nucleic Acids Res; 2016 Sep; 44(17):e140. PubMed ID: 27378774
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Indeterminacy of reverse engineering of Gene Regulatory Networks: the curse of gene elasticity.
    Krishnan A; Giuliani A; Tomita M
    PLoS One; 2007 Jun; 2(6):e562. PubMed ID: 17593963
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Bayesian inference of signaling network topology in a cancer cell line.
    Hill SM; Lu Y; Molina J; Heiser LM; Spellman PT; Speed TP; Gray JW; Mills GB; Mukherjee S
    Bioinformatics; 2012 Nov; 28(21):2804-10. PubMed ID: 22923301
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The executable pathway to biological networks.
    Fisher J; Piterman N
    Brief Funct Genomics; 2010 Jan; 9(1):79-92. PubMed ID: 20118126
    [TBL] [Abstract][Full Text] [Related]  

  • 6. k- Strong Inference Algorithm: A Hybrid Information Theory Based Gene Network Inference Algorithm.
    Cingiz MÖ
    Mol Biotechnol; 2023 Nov; ():. PubMed ID: 37950851
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Assessing and combining reliability of protein interaction sources.
    Leach S; Gabow A; Hunter L; Goldberg DS
    Pac Symp Biocomput; 2007; ():433-44. PubMed ID: 17990508
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Bifurcations in adaptive vascular networks: Toward model calibration.
    Klemm K; Martens EA
    Chaos; 2023 Sep; 33(9):. PubMed ID: 37748484
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A comparative evaluation of data-merging and meta-analysis methods for reconstructing gene-gene interactions.
    Lagani V; Karozou AD; Gomez-Cabrero D; Silberberg G; Tsamardinos I
    BMC Bioinformatics; 2016 Jun; 17 Suppl 5(Suppl 5):194. PubMed ID: 27294826
    [TBL] [Abstract][Full Text] [Related]  

  • 10. SINCERA: A Pipeline for Single-Cell RNA-Seq Profiling Analysis.
    Guo M; Wang H; Potter SS; Whitsett JA; Xu Y
    PLoS Comput Biol; 2015 Nov; 11(11):e1004575. PubMed ID: 26600239
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comprehensive meta-analysis, co-expression, and miRNA nested network analysis identifies gene candidates in citrus against Huanglongbing disease.
    Rawat N; Kiran SP; Du D; Gmitter FG; Deng Z
    BMC Plant Biol; 2015 Jul; 15():184. PubMed ID: 26215595
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The inferred cardiogenic gene regulatory network in the mammalian heart.
    Bazil JN; Stamm KD; Li X; Thiagarajan R; Nelson TJ; Tomita-Mitchell A; Beard DA
    PLoS One; 2014; 9(6):e100842. PubMed ID: 24971943
    [TBL] [Abstract][Full Text] [Related]  

  • 13. DeGNServer: deciphering genome-scale gene networks through high performance reverse engineering analysis.
    Li J; Wei H; Zhao PX
    Biomed Res Int; 2013; 2013():856325. PubMed ID: 24328032
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Identification of cytokinin-responsive genes using microarray meta-analysis and RNA-Seq in Arabidopsis.
    Bhargava A; Clabaugh I; To JP; Maxwell BB; Chiang YH; Schaller GE; Loraine A; Kieber JJ
    Plant Physiol; 2013 May; 162(1):272-94. PubMed ID: 23524861
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Investigating meta-approaches for reconstructing gene networks in a mammalian cellular context.
    Nazri A; Lio P
    PLoS One; 2012; 7(1):e28713. PubMed ID: 22253694
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Combining multiple results of a reverse-engineering algorithm: application to the DREAM five-gene network challenge.
    Marbach D; Mattiussi C; Floreano D
    Ann N Y Acad Sci; 2009 Mar; 1158():102-13. PubMed ID: 19348636
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Inferring the conservative causal core of gene regulatory networks.
    Altay G; Emmert-Streib F
    BMC Syst Biol; 2010 Sep; 4():132. PubMed ID: 20920161
    [TBL] [Abstract][Full Text] [Related]  

  • 18. ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context.
    Margolin AA; Nemenman I; Basso K; Wiggins C; Stolovitzky G; Dalla Favera R; Califano A
    BMC Bioinformatics; 2006 Mar; 7 Suppl 1(Suppl 1):S7. PubMed ID: 16723010
    [TBL] [Abstract][Full Text] [Related]  

  • 19.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 4.