84 related articles for article (PubMed ID: 22255597)
1. Detection of copy number variation using scale space filtering.
Lee J; Kim B; Yoon J; Lee U
Annu Int Conf IEEE Eng Med Biol Soc; 2011; 2011():5555-8. PubMed ID: 22255597
[TBL] [Abstract][Full Text] [Related]
2. A computational method for detecting copy number variations using scale-space filtering.
Lee J; Lee U; Kim B; Yoon J
BMC Bioinformatics; 2013 Feb; 14():57. PubMed ID: 23418726
[TBL] [Abstract][Full Text] [Related]
3. Estimation of correlations between copy-number variants in non-coding DNA.
Stamoulis C
Annu Int Conf IEEE Eng Med Biol Soc; 2011; 2011():5563-6. PubMed ID: 22255599
[TBL] [Abstract][Full Text] [Related]
4. Targeted interrogation of copy number variation using SCIMMkit.
Zerr T; Cooper GM; Eichler EE; Nickerson DA
Bioinformatics; 2010 Jan; 26(1):120-2. PubMed ID: 19846438
[TBL] [Abstract][Full Text] [Related]
5. Exome sequence read depth methods for identifying copy number changes.
Kadalayil L; Rafiq S; Rose-Zerilli MJ; Pengelly RJ; Parker H; Oscier D; Strefford JC; Tapper WJ; Gibson J; Ennis S; Collins A
Brief Bioinform; 2015 May; 16(3):380-92. PubMed ID: 25169955
[TBL] [Abstract][Full Text] [Related]
6. Noise cancellation using total variation for copy number variation detection.
Zare F; Hosny A; Nabavi S
BMC Bioinformatics; 2018 Oct; 19(Suppl 11):361. PubMed ID: 30343665
[TBL] [Abstract][Full Text] [Related]
7. Sparse representation and Bayesian detection of genome copy number alterations from microarray data.
Pique-Regi R; Monso-Varona J; Ortega A; Seeger RC; Triche TJ; Asgharzadeh S
Bioinformatics; 2008 Feb; 24(3):309-18. PubMed ID: 18203770
[TBL] [Abstract][Full Text] [Related]
8. CNV-CH: A Convex Hull Based Segmentation Approach to Detect Copy Number Variations (CNV) Using Next-Generation Sequencing Data.
Sinha R; Samaddar S; De RK
PLoS One; 2015; 10(8):e0135895. PubMed ID: 26291322
[TBL] [Abstract][Full Text] [Related]
9. Copy number determination of the gene for the human pancreatic polypeptide receptor NPY4R using read depth analysis and droplet digital PCR.
Shebanits K; Günther T; Johansson ACV; Maqbool K; Feuk L; Jakobsson M; Larhammar D
BMC Biotechnol; 2019 Jun; 19(1):31. PubMed ID: 31164119
[TBL] [Abstract][Full Text] [Related]
10. Evaluation of somatic copy number estimation tools for whole-exome sequencing data.
Nam JY; Kim NK; Kim SC; Joung JG; Xi R; Lee S; Park PJ; Park WY
Brief Bioinform; 2016 Mar; 17(2):185-92. PubMed ID: 26210357
[TBL] [Abstract][Full Text] [Related]
11. A novel framework for analyzing somatic copy number aberrations and tumor subclones for paired heterogeneous tumor samples.
Xia H; Li A; Yu Z; Liu X; Feng H
Biomed Mater Eng; 2015; 26 Suppl 1():S1845-53. PubMed ID: 26405956
[TBL] [Abstract][Full Text] [Related]
12. High-resolution DNA analysis of human embryonic stem cell lines reveals culture-induced copy number changes and loss of heterozygosity.
Närvä E; Autio R; Rahkonen N; Kong L; Harrison N; Kitsberg D; Borghese L; Itskovitz-Eldor J; Rasool O; Dvorak P; Hovatta O; Otonkoski T; Tuuri T; Cui W; Brüstle O; Baker D; Maltby E; Moore HD; Benvenisty N; Andrews PW; Yli-Harja O; Lahesmaa R
Nat Biotechnol; 2010 Apr; 28(4):371-7. PubMed ID: 20351689
[TBL] [Abstract][Full Text] [Related]
13. GEAR: genomic enrichment analysis of regional DNA copy number changes.
Kim TM; Jung YC; Rhyu MG; Jung MH; Chung YJ
Bioinformatics; 2008 Feb; 24(3):420-1. PubMed ID: 18037611
[TBL] [Abstract][Full Text] [Related]
14. Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants.
Xi R; Lee S; Xia Y; Kim TM; Park PJ
Nucleic Acids Res; 2016 Jul; 44(13):6274-86. PubMed ID: 27260798
[TBL] [Abstract][Full Text] [Related]
15. Shape-based retrieval of CNV regions in read coverage data.
Hong S; Yoon J; Hong D; Lee U; Kim B; Park S
Int J Data Min Bioinform; 2014; 9(3):254-76. PubMed ID: 25163168
[TBL] [Abstract][Full Text] [Related]
16. Determining multiallelic complex copy number and sequence variation from high coverage exome sequencing data.
Forni D; Martin D; Abujaber R; Sharp AJ; Sironi M; Hollox EJ
BMC Genomics; 2015 Nov; 16():891. PubMed ID: 26526070
[TBL] [Abstract][Full Text] [Related]
17. Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes.
Khalil AIS; Khyriem C; Chattopadhyay A; Sanyal A
BMC Bioinformatics; 2020 Apr; 21(1):147. PubMed ID: 32299346
[TBL] [Abstract][Full Text] [Related]
18. SM-RCNV: a statistical method to detect recurrent copy number variations in sequenced samples.
Li Y; Yuan X; Zhang J; Yang L; Bai J; Jiang S
Genes Genomics; 2019 May; 41(5):529-536. PubMed ID: 30779024
[TBL] [Abstract][Full Text] [Related]
19. Copy Number Variations Detection: Unravelling the Problem in Tangible Aspects.
do Nascimento F; Guimaraes KS
IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(6):1237-1250. PubMed ID: 27295681
[TBL] [Abstract][Full Text] [Related]
20. Optimization of Signal Decomposition Matched Filtering (SDMF) for Improved Detection of Copy-Number Variations.
Stamoulis C; Betensky RA
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(3):584-91. PubMed ID: 27295643
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]