214 related articles for article (PubMed ID: 22275138)
1. Thermodynamic basis of selectivity in guide-target-mismatched RNA interference.
Joseph TT; Osman R
Proteins; 2012 May; 80(5):1283-98. PubMed ID: 22275138
[TBL] [Abstract][Full Text] [Related]
2. Convergent transmission of RNAi guide-target mismatch information across Argonaute internal allosteric network.
Joseph TT; Osman R
PLoS Comput Biol; 2012; 8(9):e1002693. PubMed ID: 23028290
[TBL] [Abstract][Full Text] [Related]
3. Large domain motions in Ago protein controlled by the guide DNA-strand seed region determine the Ago-DNA-mRNA complex recognition process.
Xia Z; Huynh T; Ren P; Zhou R
PLoS One; 2013; 8(1):e54620. PubMed ID: 23382927
[TBL] [Abstract][Full Text] [Related]
4. Effects of the PIWI/MID domain of Argonaute protein on the association of miRNAi's seed base with the target.
Wang Z; Wang Y; Liu T; Wang Y; Zhang W
RNA; 2019 May; 25(5):620-629. PubMed ID: 30770397
[TBL] [Abstract][Full Text] [Related]
5. Binding-induced functional-domain motions in the Argonaute characterized by adaptive advanced sampling.
Pourjafar-Dehkordi D; Zacharias M
PLoS Comput Biol; 2021 Nov; 17(11):e1009625. PubMed ID: 34843451
[TBL] [Abstract][Full Text] [Related]
6. Single-molecule fluorescence measurements reveal the reaction mechanisms of the core RISC, composed of human Argonaute 2 and a guide RNA.
Jo MH; Song JJ; Hohng S
BMB Rep; 2015 Dec; 48(12):643-4. PubMed ID: 26592935
[TBL] [Abstract][Full Text] [Related]
7. Probing the Binding Interactions between Chemically Modified siRNAs and Human Argonaute 2 Using Microsecond Molecular Dynamics Simulations.
Harikrishna S; Pradeepkumar PI
J Chem Inf Model; 2017 Apr; 57(4):883-896. PubMed ID: 28287733
[TBL] [Abstract][Full Text] [Related]
8. Mg2+ effect on argonaute and RNA duplex by molecular dynamics and bioinformatics implications.
Nam S; Ryu H; Son WJ; Kim YH; Kim KT; Balch C; Nephew KP; Lee J
PLoS One; 2014; 9(10):e109745. PubMed ID: 25330448
[TBL] [Abstract][Full Text] [Related]
9. Structural basis for the recognition of guide RNA and target DNA heteroduplex by Argonaute.
Miyoshi T; Ito K; Murakami R; Uchiumi T
Nat Commun; 2016 Jun; 7():11846. PubMed ID: 27325485
[TBL] [Abstract][Full Text] [Related]
10. Identifying mRNA sequence elements for target recognition by human Argonaute proteins.
Li J; Kim T; Nutiu R; Ray D; Hughes TR; Zhang Z
Genome Res; 2014 May; 24(5):775-85. PubMed ID: 24663241
[TBL] [Abstract][Full Text] [Related]
11. Helix-7 in Argonaute2 shapes the microRNA seed region for rapid target recognition.
Klum SM; Chandradoss SD; Schirle NT; Joo C; MacRae IJ
EMBO J; 2018 Jan; 37(1):75-88. PubMed ID: 28939659
[TBL] [Abstract][Full Text] [Related]
12. Single-Molecule Imaging Reveals that Argonaute Reshapes the Binding Properties of Its Nucleic Acid Guides.
Salomon WE; Jolly SM; Moore MJ; Zamore PD; Serebrov V
Cell; 2015 Jul; 162(1):84-95. PubMed ID: 26140592
[TBL] [Abstract][Full Text] [Related]
13. Modulation of the RNA Interference Activity Using Central Mismatched siRNAs and Acyclic Threoninol Nucleic Acids (aTNA) Units.
Alagia A; Terrazas M; Eritja R
Molecules; 2015 Apr; 20(5):7602-19. PubMed ID: 25919280
[TBL] [Abstract][Full Text] [Related]
14. Differences in silencing of mismatched targets by sliced versus diced siRNAs.
Sun G; Wang J; Huang Y; Yuan CW; Zhang K; Hu S; Chen L; Lin RJ; Yen Y; Riggs AD
Nucleic Acids Res; 2018 Jul; 46(13):6806-6822. PubMed ID: 29718312
[TBL] [Abstract][Full Text] [Related]
15. A Seed Mismatch Enhances Argonaute2-Catalyzed Cleavage and Partially Rescues Severely Impaired Cleavage Found in Fish.
Chen GR; Sive H; Bartel DP
Mol Cell; 2017 Dec; 68(6):1095-1107.e5. PubMed ID: 29272705
[TBL] [Abstract][Full Text] [Related]
16. miRNA-target chimeras reveal miRNA 3'-end pairing as a major determinant of Argonaute target specificity.
Moore MJ; Scheel TK; Luna JM; Park CY; Fak JJ; Nishiuchi E; Rice CM; Darnell RB
Nat Commun; 2015 Nov; 6():8864. PubMed ID: 26602609
[TBL] [Abstract][Full Text] [Related]
17. Understanding the effect of locked nucleic acid and 2'-O-methyl modification on the hybridization thermodynamics of a miRNA-mRNA pair in the presence and absence of AfPiwi protein.
Kumar S; Mapa K; Maiti S
Biochemistry; 2014 Mar; 53(10):1607-15. PubMed ID: 24564489
[TBL] [Abstract][Full Text] [Related]
18. Enhancement of allele discrimination by introduction of nucleotide mismatches into siRNA in allele-specific gene silencing by RNAi.
Ohnishi Y; Tamura Y; Yoshida M; Tokunaga K; Hohjoh H
PLoS One; 2008 May; 3(5):e2248. PubMed ID: 18493311
[TBL] [Abstract][Full Text] [Related]
19. Accommodation of Helical Imperfections in Rhodobacter sphaeroides Argonaute Ternary Complexes with Guide RNA and Target DNA.
Liu Y; Esyunina D; Olovnikov I; Teplova M; Kulbachinskiy A; Aravin AA; Patel DJ
Cell Rep; 2018 Jul; 24(2):453-462. PubMed ID: 29996105
[TBL] [Abstract][Full Text] [Related]
20. Beyond the seed: structural basis for supplementary microRNA targeting by human Argonaute2.
Sheu-Gruttadauria J; Xiao Y; Gebert LF; MacRae IJ
EMBO J; 2019 Jul; 38(13):e101153. PubMed ID: 31268608
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
