These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

152 related articles for article (PubMed ID: 22276164)

  • 1. Impact of deep coalescence on the reliability of species tree inference from different types of DNA markers in mammals.
    Sánchez-Gracia A; Castresana J
    PLoS One; 2012; 7(1):e30239. PubMed ID: 22276164
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The gene tree delusion.
    Springer MS; Gatesy J
    Mol Phylogenet Evol; 2016 Jan; 94(Pt A):1-33. PubMed ID: 26238460
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Phylogenetic analysis at deep timescales: unreliable gene trees, bypassed hidden support, and the coalescence/concatalescence conundrum.
    Gatesy J; Springer MS
    Mol Phylogenet Evol; 2014 Nov; 80():231-66. PubMed ID: 25152276
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Applying species-tree analyses to deep phylogenetic histories: challenges and potential suggested from a survey of empirical phylogenetic studies.
    Lanier HC; Knowles LL
    Mol Phylogenet Evol; 2015 Feb; 83():191-9. PubMed ID: 25450097
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Estimating species phylogeny from gene-tree probabilities despite incomplete lineage sorting: an example from Melanoplus grasshoppers.
    Carstens BC; Knowles LL
    Syst Biol; 2007 Jun; 56(3):400-11. PubMed ID: 17520504
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The accuracy of species tree estimation under simulation: a comparison of methods.
    Leaché AD; Rannala B
    Syst Biol; 2011 Mar; 60(2):126-37. PubMed ID: 21088009
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Impact of deep coalescence and recombination on the estimation of phylogenetic relationships among species using AFLP markers.
    García-Pereira MJ; Carvajal-Rodríguez A; Whelan S; Caballero A; Quesada H
    Mol Phylogenet Evol; 2014 Jul; 76():102-9. PubMed ID: 24631855
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The effect of alignment uncertainty, substitution models and priors in building and dating the mammal tree of life.
    Du Y; Wu S; Edwards SV; Liu L
    BMC Evol Biol; 2019 Nov; 19(1):203. PubMed ID: 31694538
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design.
    McCormack JE; Huang H; Knowles LL
    Syst Biol; 2009 Oct; 58(5):501-8. PubMed ID: 20525604
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Genes with minimal phylogenetic information are problematic for coalescent analyses when gene tree estimation is biased.
    Xi Z; Liu L; Davis CC
    Mol Phylogenet Evol; 2015 Nov; 92():63-71. PubMed ID: 26115844
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Accounting for Uncertainty in Gene Tree Estimation: Summary-Coalescent Species Tree Inference in a Challenging Radiation of Australian Lizards.
    Blom MPK; Bragg JG; Potter S; Moritz C
    Syst Biol; 2017 May; 66(3):352-366. PubMed ID: 28039387
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis.
    McCormack JE; Faircloth BC; Crawford NG; Gowaty PA; Brumfield RT; Glenn TC
    Genome Res; 2012 Apr; 22(4):746-54. PubMed ID: 22207614
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Assessing the potential of RAD-sequencing to resolve phylogenetic relationships within species radiations: The fly genus Chiastocheta (Diptera: Anthomyiidae) as a case study.
    Suchan T; Espíndola A; Rutschmann S; Emerson BC; Gori K; Dessimoz C; Arrigo N; Ronikier M; Alvarez N
    Mol Phylogenet Evol; 2017 Sep; 114():189-198. PubMed ID: 28645767
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Anchored hybrid enrichment generated nuclear, plastid and mitochondrial markers resolve the Lepanthes horrida (Orchidaceae: Pleurothallidinae) species complex.
    Bogarín D; Pérez-Escobar OA; Groenenberg D; Holland SD; Karremans AP; Lemmon EM; Lemmon AR; Pupulin F; Smets E; Gravendeel B
    Mol Phylogenet Evol; 2018 Dec; 129():27-47. PubMed ID: 30041026
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Inferring the mammal tree: Species-level sets of phylogenies for questions in ecology, evolution, and conservation.
    Upham NS; Esselstyn JA; Jetz W
    PLoS Biol; 2019 Dec; 17(12):e3000494. PubMed ID: 31800571
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Consensus properties for the deep coalescence problem and their application for scalable tree search.
    Lin HT; Burleigh JG; Eulenstein O
    BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S12. PubMed ID: 22759417
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Species Tree Estimation from Gene Trees by Minimizing Deep Coalescence and Maximizing Quartet Consistency: A Comparative Study and the Presence of Pseudo Species Tree Terraces.
    Farah IT; Islam M; Zinat KT; Rahman AH; Bayzid S
    Syst Biol; 2021 Oct; 70(6):1213-1231. PubMed ID: 33844023
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Consistency properties of species tree inference by minimizing deep coalescences.
    Than CV; Rosenberg NA
    J Comput Biol; 2011 Jan; 18(1):1-15. PubMed ID: 21210728
    [TBL] [Abstract][Full Text] [Related]  

  • 19. What is the danger of the anomaly zone for empirical phylogenetics?
    Huang H; Knowles LL
    Syst Biol; 2009 Oct; 58(5):527-36. PubMed ID: 20525606
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Multi-locus species tree for the Amazonian peacock basses (Cichlidae: Cichla): emergent phylogenetic signal despite limited nuclear variation.
    Willis SC; Farias IP; Ortí G
    Mol Phylogenet Evol; 2013 Dec; 69(3):479-90. PubMed ID: 23939135
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.