152 related articles for article (PubMed ID: 22287624)
1. Crystal structure of a c-kit promoter quadruplex reveals the structural role of metal ions and water molecules in maintaining loop conformation.
Wei D; Parkinson GN; Reszka AP; Neidle S
Nucleic Acids Res; 2012 May; 40(10):4691-700. PubMed ID: 22287624
[TBL] [Abstract][Full Text] [Related]
2. Crystal structure of a three-tetrad, parallel, K
Chen EV; Nicoludis JM; Powell BM; Li KS; Yatsunyk LA
Acta Crystallogr F Struct Biol Commun; 2023 Jun; 79(Pt 6):144-150. PubMed ID: 37223975
[TBL] [Abstract][Full Text] [Related]
3. The major G-quadruplex formed in the human BCL-2 proximal promoter adopts a parallel structure with a 13-nt loop in K+ solution.
Agrawal P; Lin C; Mathad RI; Carver M; Yang D
J Am Chem Soc; 2014 Feb; 136(5):1750-3. PubMed ID: 24450880
[TBL] [Abstract][Full Text] [Related]
4. A G-rich sequence within the c-kit oncogene promoter forms a parallel G-quadruplex having asymmetric G-tetrad dynamics.
Hsu ST; Varnai P; Bugaut A; Reszka AP; Neidle S; Balasubramanian S
J Am Chem Soc; 2009 Sep; 131(37):13399-409. PubMed ID: 19705869
[TBL] [Abstract][Full Text] [Related]
5. NMR solution structure of the major G-quadruplex structure formed in the human BCL2 promoter region.
Dai J; Chen D; Jones RA; Hurley LH; Yang D
Nucleic Acids Res; 2006; 34(18):5133-44. PubMed ID: 16998187
[TBL] [Abstract][Full Text] [Related]
6. Solution structure of all parallel G-quadruplex formed by the oncogene RET promoter sequence.
Tong X; Lan W; Zhang X; Wu H; Liu M; Cao C
Nucleic Acids Res; 2011 Aug; 39(15):6753-63. PubMed ID: 21540209
[TBL] [Abstract][Full Text] [Related]
7. Long promoter sequences form higher-order G-quadruplexes: an integrative structural biology study of c-Myc, k-Ras and c-Kit promoter sequences.
Monsen RC; DeLeeuw LW; Dean WL; Gray RD; Chakravarthy S; Hopkins JB; Chaires JB; Trent JO
Nucleic Acids Res; 2022 Apr; 50(7):4127-4147. PubMed ID: 35325198
[TBL] [Abstract][Full Text] [Related]
8. Determinants of DNA quadruplex structural type: sequence and potassium binding.
Marathias VM; Bolton PH
Biochemistry; 1999 Apr; 38(14):4355-64. PubMed ID: 10194354
[TBL] [Abstract][Full Text] [Related]
9. An in silico investigation of the binding modes and pathway of APTO-253 on c-KIT G-quadruplex DNA.
Pal S; Paul S
Phys Chem Chem Phys; 2021 Feb; 23(5):3361-3376. PubMed ID: 33502401
[TBL] [Abstract][Full Text] [Related]
10. NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Winnerdy FR; Bakalar B; Maity A; Vandana JJ; Mechulam Y; Schmitt E; Phan AT
Nucleic Acids Res; 2019 Sep; 47(15):8272-8281. PubMed ID: 31216034
[TBL] [Abstract][Full Text] [Related]
11. c-kit2 G-quadruplex stabilized via a covalent probe: exploring G-quartet asymmetry.
Peterková K; Durník I; Marek R; Plavec J; Podbevšek P
Nucleic Acids Res; 2021 Sep; 49(15):8947-8960. PubMed ID: 34365512
[TBL] [Abstract][Full Text] [Related]
12. Theoretical investigation of conformational deviation of the human parallel telomeric G-quadruplex DNA in the presence of different salt concentrations and temperatures under confinement.
Pal S; Paul S
Phys Chem Chem Phys; 2021 Jul; 23(26):14372-14382. PubMed ID: 34179908
[TBL] [Abstract][Full Text] [Related]
13. Double-stranded flanking ends affect the folding kinetics and conformational equilibrium of G-quadruplexes forming sequences within the promoter of KIT oncogene.
Vesco G; Lamperti M; Salerno D; Marrano CA; Cassina V; Rigo R; Buglione E; Bondani M; Nicoletto G; Mantegazza F; Sissi C; Nardo L
Nucleic Acids Res; 2021 Sep; 49(17):9724-9737. PubMed ID: 34478543
[TBL] [Abstract][Full Text] [Related]
14. G-Quadruplex loops regulate PARP-1 enzymatic activation.
Edwards AD; Marecki JC; Byrd AK; Gao J; Raney KD
Nucleic Acids Res; 2021 Jan; 49(1):416-431. PubMed ID: 33313902
[TBL] [Abstract][Full Text] [Related]
15. Investigation of the Interaction between Aloe vera Anthraquinone Metabolites and c-Myc and C-Kit G-Quadruplex DNA Structures.
Dallavalle S; Artali R; Princiotto S; Musso L; Borgonovo G; Mazzini S
Int J Mol Sci; 2022 Dec; 23(24):. PubMed ID: 36555657
[TBL] [Abstract][Full Text] [Related]
16. Crystal structure of the complementary quadruplex formed by d(GCATGCT) at atomic resolution.
Thorpe JH; Teixeira SC; Gale BC; Cardin CJ
Nucleic Acids Res; 2003 Feb; 31(3):844-9. PubMed ID: 12560479
[TBL] [Abstract][Full Text] [Related]
17. Porphyrin-based ligand interaction with G-quadruplex: Metal cation effects.
Otovat F; Bozorgmehr MR; Mahmoudi A; Morsali A
J Mol Recognit; 2023 Aug; 36(8):e3017. PubMed ID: 37025015
[TBL] [Abstract][Full Text] [Related]
18. Gas-Phase Fragmentation as a Probe of G-Quadruplex Formation.
Brundridge NM; Dickerhoff J; Yang D; McLuckey SA
Anal Chem; 2023 Oct; 95(40):15057-15067. PubMed ID: 37774231
[TBL] [Abstract][Full Text] [Related]
19. On Water Arrangements in Right- and Left-Handed DNA Structures.
Yatsunyk LA; Neidle S
Molecules; 2024 Jan; 29(2):. PubMed ID: 38276583
[TBL] [Abstract][Full Text] [Related]
20. Studying the Dynamics of a Complex G-Quadruplex System: Insights into the Comparison of MD and NMR Data.
Castelli M; Doria F; Freccero M; Colombo G; Moroni E
J Chem Theory Comput; 2022 Jul; 18(7):4515-4528. PubMed ID: 35666124
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
