BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

190 related articles for article (PubMed ID: 22298290)

  • 1. Retention time alignment of LC/MS data by a divide-and-conquer algorithm.
    Zhang Z
    J Am Soc Mass Spectrom; 2012 Apr; 23(4):764-72. PubMed ID: 22298290
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Time alignment algorithms based on selected mass traces for complex LC-MS data.
    Christin C; Hoefsloot HC; Smilde AK; Suits F; Bischoff R; Horvatovich PL
    J Proteome Res; 2010 Mar; 9(3):1483-95. PubMed ID: 20070124
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets.
    Hoffmann N; Keck M; Neuweger H; Wilhelm M; Högy P; Niehaus K; Stoye J
    BMC Bioinformatics; 2012 Aug; 13():214. PubMed ID: 22920415
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A Simple Method for Peak Alignment Using Relative Retention Time Related to an Inherent Peak in Liquid Chromatography-Mass Spectrometry-Based Metabolomics.
    Wang Y; Ma L; Zhang M; Chen M; Li P; He C; Yan C; Wan JB
    J Chromatogr Sci; 2019 Jan; 57(1):9-16. PubMed ID: 30084945
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Shape-based feature matching improves protein identification via LC-MS and tandem MS.
    Noy K; Towfic F; Wittenberg GM; Fasulo D
    J Comput Biol; 2011 Apr; 18(4):547-57. PubMed ID: 21417940
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Retention time alignment algorithms for LC/MS data must consider non-linear shifts.
    Podwojski K; Fritsch A; Chamrad DC; Paul W; Sitek B; Stühler K; Mutzel P; Stephan C; Meyer HE; Urfer W; Ickstadt K; Rahnenführer J
    Bioinformatics; 2009 Mar; 25(6):758-64. PubMed ID: 19176558
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Optimized time alignment algorithm for LC-MS data: correlation optimized warping using component detection algorithm-selected mass chromatograms.
    Christin C; Smilde AK; Hoefsloot HC; Suits F; Bischoff R; Horvatovich PL
    Anal Chem; 2008 Sep; 80(18):7012-21. PubMed ID: 18715018
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Incorporating peak grouping information for alignment of multiple liquid chromatography-mass spectrometry datasets.
    Wandy J; Daly R; Breitling R; Rogers S
    Bioinformatics; 2015 Jun; 31(12):1999-2006. PubMed ID: 25649621
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inversion of peak elution order prevents uniform time alignment of complex liquid-chromatography coupled to mass spectrometry datasets.
    Mitra V; Smilde A; Hoefsloot H; Suits F; Bischoff R; Horvatovich P
    J Chromatogr A; 2014 Dec; 1373():61-72. PubMed ID: 25482036
    [TBL] [Abstract][Full Text] [Related]  

  • 10. DeepRTAlign: toward accurate retention time alignment for large cohort mass spectrometry data analysis.
    Liu Y; Yang Y; Chen W; Shen F; Xie L; Zhang Y; Zhai Y; He F; Zhu Y; Chang C
    Nat Commun; 2023 Dec; 14(1):8188. PubMed ID: 38081814
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements.
    Lange E; Tautenhahn R; Neumann S; Gröpl C
    BMC Bioinformatics; 2008 Sep; 9():375. PubMed ID: 18793413
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Graph-based peak alignment algorithms for multiple liquid chromatography-mass spectrometry datasets.
    Wang J; Lam H
    Bioinformatics; 2013 Oct; 29(19):2469-76. PubMed ID: 23904508
    [TBL] [Abstract][Full Text] [Related]  

  • 13. MET-COFEA: a liquid chromatography/mass spectrometry data processing platform for metabolite compound feature extraction and annotation.
    Zhang W; Chang J; Lei Z; Huhman D; Sumner LW; Zhao PX
    Anal Chem; 2014 Jul; 86(13):6245-53. PubMed ID: 24856452
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline.
    Jaitly N; Monroe ME; Petyuk VA; Clauss TR; Adkins JN; Smith RD
    Anal Chem; 2006 Nov; 78(21):7397-409. PubMed ID: 17073405
    [TBL] [Abstract][Full Text] [Related]  

  • 15. An alignment algorithm for LC-MS-based metabolomics dataset assisted by MS/MS information.
    Li L; Ren W; Kong H; Zhao C; Zhao X; Lin X; Lu X; Xu G
    Anal Chim Acta; 2017 Oct; 990():96-102. PubMed ID: 29029747
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Multi-profile Bayesian alignment model for LC-MS data analysis with integration of internal standards.
    Tsai TH; Tadesse MG; Di Poto C; Pannell LK; Mechref Y; Wang Y; Ressom HW
    Bioinformatics; 2013 Nov; 29(21):2774-80. PubMed ID: 24013927
    [TBL] [Abstract][Full Text] [Related]  

  • 17. MassUntangler: a novel alignment tool for label-free liquid chromatography-mass spectrometry proteomic data.
    Ballardini R; Benevento M; Arrigoni G; Pattini L; Roda A
    J Chromatogr A; 2011 Dec; 1218(49):8859-68. PubMed ID: 21783198
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Feature based retention time alignment for improved HDX MS analysis.
    Venable JD; Scuba W; Brock A
    J Am Soc Mass Spectrom; 2013 Apr; 24(4):642-5. PubMed ID: 23430702
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A geometric approach for the alignment of liquid chromatography-mass spectrometry data.
    Lange E; Gröpl C; Schulz-Trieglaff O; Leinenbach A; Huber C; Reinert K
    Bioinformatics; 2007 Jul; 23(13):i273-81. PubMed ID: 17646306
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A high-throughput processing service for retention time alignment of complex proteomics and metabolomics LC-MS data.
    Ahmad I; Suits F; Hoekman B; Swertz MA; Byelas H; Dijkstra M; Hooft R; Katsubo D; van Breukelen B; Bischoff R; Horvatovich P
    Bioinformatics; 2011 Apr; 27(8):1176-8. PubMed ID: 21349866
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.