These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

225 related articles for article (PubMed ID: 22313351)

  • 21. A structural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment.
    Bauer J; Xing G; Yagi H; Sayer JM; Jerina DM; Ling H
    Proc Natl Acad Sci U S A; 2007 Sep; 104(38):14905-10. PubMed ID: 17848527
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Structural Basis for Error-Free Bypass of the 5-N-Methylformamidopyrimidine-dG Lesion by Human DNA Polymerase η and Sulfolobus solfataricus P2 Polymerase IV.
    Patra A; Banerjee S; Johnson Salyard TL; Malik CK; Christov PP; Rizzo CJ; Stone MP; Egli M
    J Am Chem Soc; 2015 Jun; 137(22):7011-4. PubMed ID: 25988947
    [TBL] [Abstract][Full Text] [Related]  

  • 23. A method to accurately quantitate intensities of (32)P-DNA bands when multiple bands appear in a single lane of a gel is used to study dNTP insertion opposite a benzo[a]pyrene-dG adduct by Sulfolobus DNA polymerases Dpo4 and Dbh.
    Sholder G; Loechler EL
    DNA Repair (Amst); 2015 Jan; 25():97-103. PubMed ID: 25497330
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Visualizing sequence-governed nucleotide selectivities and mutagenic consequences through a replicative cycle: processing of a bulky carcinogen N2-dG lesion in a Y-family DNA polymerase.
    Xu P; Oum L; Lee YC; Geacintov NE; Broyde S
    Biochemistry; 2009 Jun; 48(22):4677-90. PubMed ID: 19364137
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Structure and activity of Y-class DNA polymerase DPO4 from Sulfolobus solfataricus with templates containing the hydrophobic thymine analog 2,4-difluorotoluene.
    Irimia A; Eoff RL; Pallan PS; Guengerich FP; Egli M
    J Biol Chem; 2007 Dec; 282(50):36421-33. PubMed ID: 17951245
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Mechanistic Basis for the Bypass of a Bulky DNA Adduct Catalyzed by a Y-Family DNA Polymerase.
    Vyas R; Efthimiopoulos G; Tokarsky EJ; Malik CK; Basu AK; Suo Z
    J Am Chem Soc; 2015 Sep; 137(37):12131-42. PubMed ID: 26327169
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Y-Family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications.
    Chandani S; Loechler EL
    J Mol Graph Model; 2009 Apr; 27(7):759-69. PubMed ID: 19188081
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Chemistry and biology of DNA containing 1,N(2)-deoxyguanosine adducts of the alpha,beta-unsaturated aldehydes acrolein, crotonaldehyde, and 4-hydroxynonenal.
    Minko IG; Kozekov ID; Harris TM; Rizzo CJ; Lloyd RS; Stone MP
    Chem Res Toxicol; 2009 May; 22(5):759-78. PubMed ID: 19397281
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Effect of N2-guanyl modifications on early steps in catalysis of polymerization by Sulfolobus solfataricus P2 DNA polymerase Dpo4 T239W.
    Zhang H; Guengerich FP
    J Mol Biol; 2010 Feb; 395(5):1007-18. PubMed ID: 19969000
    [TBL] [Abstract][Full Text] [Related]  

  • 30. In vitro bypass of malondialdehyde-deoxyguanosine adducts: differential base selection during extension by the Klenow fragment of DNA polymerase I is the critical determinant of replication outcome.
    Hashim MF; Riggins JN; Schnetz-Boutaud N; Voehler M; Stone MP; Marnett LJ
    Biochemistry; 2004 Sep; 43(37):11828-35. PubMed ID: 15362868
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Kinetic and structural mechanisms of (5'S)-8,5'-cyclo-2'-deoxyguanosine-induced dna replication stalling.
    Xu W; Ouellette AM; Wawrzak Z; Shriver SJ; Anderson SM; Zhao L
    Biochemistry; 2015 Jan; 54(3):639-51. PubMed ID: 25569151
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Versatility of Y-family Sulfolobus solfataricus DNA polymerase Dpo4 in translesion synthesis past bulky N2-alkylguanine adducts.
    Zhang H; Eoff RL; Kozekov ID; Rizzo CJ; Egli M; Guengerich FP
    J Biol Chem; 2009 Feb; 284(6):3563-76. PubMed ID: 19059910
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Structural alignment of the (+)-trans-anti-benzo[a]pyrene-dG adduct positioned opposite dC at a DNA template-primer junction.
    Feng B; Gorin A; Hingerty BE; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1997 Nov; 36(45):13769-79. PubMed ID: 9374853
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Promutagenic bypass of 7,8-dihydro-8-oxoadenine by translesion synthesis DNA polymerase Dpo4.
    Jung H; Lee S
    Biochem J; 2020 Aug; 477(15):2859-2871. PubMed ID: 32686822
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Structural and functional elucidation of the mechanism promoting error-prone synthesis by human DNA polymerase kappa opposite the 7,8-dihydro-8-oxo-2'-deoxyguanosine adduct.
    Irimia A; Eoff RL; Guengerich FP; Egli M
    J Biol Chem; 2009 Aug; 284(33):22467-22480. PubMed ID: 19542228
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Efficient and high fidelity incorporation of dCTP opposite 7,8-dihydro-8-oxodeoxyguanosine by Sulfolobus solfataricus DNA polymerase Dpo4.
    Zang H; Irimia A; Choi JY; Angel KC; Loukachevitch LV; Egli M; Guengerich FP
    J Biol Chem; 2006 Jan; 281(4):2358-72. PubMed ID: 16306039
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Nucleotide selectivity opposite a benzo[a]pyrene-derived N2-dG adduct in a Y-family DNA polymerase: a 5'-slippage mechanism.
    Xu P; Oum L; Geacintov NE; Broyde S
    Biochemistry; 2008 Mar; 47(9):2701-9. PubMed ID: 18260644
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Mutagenic nucleotide incorporation and hindered translocation by a food carcinogen C8-dG adduct in Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): modeling and dynamics studies.
    Zhang L; Rechkoblit O; Wang L; Patel DJ; Shapiro R; Broyde S
    Nucleic Acids Res; 2006; 34(11):3326-37. PubMed ID: 16820532
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Insights into the mismatch discrimination mechanism of Y-family DNA polymerase Dpo4.
    Jung H; Lee S
    Biochem J; 2021 May; 478(9):1769-1781. PubMed ID: 33881499
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Mechanistic investigation of the bypass of a bulky aromatic DNA adduct catalyzed by a Y-family DNA polymerase.
    Gadkari VV; Tokarsky EJ; Malik CK; Basu AK; Suo Z
    DNA Repair (Amst); 2014 Sep; 21():65-77. PubMed ID: 25048879
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 12.