BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 22342620)

  • 1. Fluorescence assay of polyamide-DNA interactions.
    Dupureur CM; Bashkin JK; Aston K; Koeller KJ; Gaston KR; He G
    Anal Biochem; 2012 Apr; 423(1):178-83. PubMed ID: 22342620
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Sequence specific fluorescence detection of double strand DNA.
    Rucker VC; Foister S; Melander C; Dervan PB
    J Am Chem Soc; 2003 Feb; 125(5):1195-202. PubMed ID: 12553822
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Size matters: DNA binding site kinetics as a function of polyamide size.
    Niederschulte J; Song Y; Bashkin JK; Dupureur CM
    Biochimie; 2022 Aug; 199():123-129. PubMed ID: 35472565
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Modulation of DNA-polyamide interaction by β-alanine substitutions: a study of positional effects on binding affinity, kinetics and thermodynamics.
    Wang S; Aston K; Koeller KJ; Harris GD; Rath NP; Bashkin JK; Wilson WD
    Org Biomol Chem; 2014 Oct; 12(38):7523-36. PubMed ID: 25141096
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DNA binding site kinetics of a large antiviral polyamide.
    Niederschulte J; Song Y; Park AH; Bashkin JK; Dupureur CM
    Biochimie; 2021 Jun; 185():146-154. PubMed ID: 33794342
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Recognition of the DNA minor groove by pyrrole-imidazole polyamides: comparison of desmethyl- and N-methylpyrrole.
    Bremer RE; Szewczyk JW; Baird EE; Dervan PB
    Bioorg Med Chem; 2000 Aug; 8(8):1947-55. PubMed ID: 11003140
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Hx, a novel fluorescent, minor groove and sequence specific recognition element: design, synthesis, and DNA binding properties of p-anisylbenzimidazole-imidazole/pyrrole-containing polyamides.
    Chavda S; Liu Y; Babu B; Davis R; Sielaff A; Ruprich J; Westrate L; Tronrud C; Ferguson A; Franks A; Tzou S; Adkins C; Rice T; Mackay H; Kluza J; Tahir SA; Lin S; Kiakos K; Bruce CD; Wilson WD; Hartley JA; Lee M
    Biochemistry; 2011 Apr; 50(15):3127-36. PubMed ID: 21388229
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Combinatorial determination of sequence specificity for nanomolar DNA-binding hairpin polyamides.
    Vashisht Gopal YN; Van Dyke MW
    Biochemistry; 2003 Jun; 42(22):6891-903. PubMed ID: 12779344
    [TBL] [Abstract][Full Text] [Related]  

  • 9. U-pin polyamide motif for recognition of the DNA minor groove.
    Heckel A; Dervan PB
    Chemistry; 2003 Jul; 9(14):3353-66. PubMed ID: 12866079
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Recognition by nonaromatic and stereochemical subunit-containing polyamides of the four Watson-Crick base pairs in the DNA minor groove.
    Zhang HF; Wu YL; Jiang SK; Wang P; Sugiyama H; Chen XL; Zhang W; Ji YJ; Guo CX
    Chembiochem; 2012 Jun; 13(9):1366-74. PubMed ID: 22615006
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Thermodynamics and site stoichiometry of DNA binding by a large antiviral hairpin polyamide.
    Song Y; Niederschulte J; Bales KN; Bashkin JK; Dupureur CM
    Biochimie; 2019 Feb; 157():149-157. PubMed ID: 30481539
    [TBL] [Abstract][Full Text] [Related]  

  • 12. DNA-templated dimerization of hairpin polyamides.
    Poulin-Kerstien AT; Dervan PB
    J Am Chem Soc; 2003 Dec; 125(51):15811-21. PubMed ID: 14677972
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Promoter scanning of the human COX-2 gene with 8-ring polyamides: unexpected weakening of polyamide-DNA binding and selectivity by replacing an internal N-Me-pyrrole with β-alanine.
    Bashkin JK; Aston K; Ramos JP; Koeller KJ; Nanjunda R; He G; Dupureur CM; David Wilson W
    Biochimie; 2013 Feb; 95(2):271-9. PubMed ID: 23023196
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Sequence-specific trapping of topoisomerase I by DNA binding polyamide-camptothecin conjugates.
    Wang CC; Dervan PB
    J Am Chem Soc; 2001 Sep; 123(36):8657-61. PubMed ID: 11535069
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Discrimination of A/T sequences in the minor groove of DNA within a cyclic polyamide motif.
    Melander C; Herman DM; Dervan PB
    Chemistry; 2000 Dec; 6(24):4487-97. PubMed ID: 11192081
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Kinetic consequences of covalent linkage of DNA binding polyamides.
    Baliga R; Baird EE; Herman DM; Melander C; Dervan PB; Crothers DM
    Biochemistry; 2001 Jan; 40(1):3-8. PubMed ID: 11141050
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Insight into DNA Minor Groove Unspecific Binding of Pyrrole Polyamide.
    Qiao H; Ma C; Zhang X; Jing X; Li C; Zhao Y
    Bioconjug Chem; 2015 Oct; 26(10):2054-61. PubMed ID: 26301419
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Influence of a terminal formamido group on the sequence recognition of DNA by polyamides.
    Lacy ER; Le NM; Price CA; Lee M; Wilson WD
    J Am Chem Soc; 2002 Mar; 124(10):2153-63. PubMed ID: 11878969
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.
    Padroni G; Withers JM; Taladriz-Sender A; Reichenbach LF; Parkinson JA; Burley GA
    J Am Chem Soc; 2019 Jun; 141(24):9555-9563. PubMed ID: 31117639
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Expanding the recognition of the minor groove of DNA by incorporation of beta-alanine in hairpin polyamides.
    Wang CC; Ellervik U; Dervan PB
    Bioorg Med Chem; 2001 Mar; 9(3):653-7. PubMed ID: 11310600
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.