BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

274 related articles for article (PubMed ID: 22346767)

  • 1. Negative supercoiling creates single-stranded patches of DNA that are substrates for AID-mediated mutagenesis.
    Parsa JY; Ramachandran S; Zaheen A; Nepal RM; Kapelnikov A; Belcheva A; Berru M; Ronai D; Martin A
    PLoS Genet; 2012 Feb; 8(2):e1002518. PubMed ID: 22346767
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Transcription-targeted DNA deamination by the AID antibody diversification enzyme.
    Chaudhuri J; Tian M; Khuong C; Chua K; Pinaud E; Alt FW
    Nature; 2003 Apr; 422(6933):726-30. PubMed ID: 12692563
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Transcription enhances AID-mediated cytidine deamination by exposing single-stranded DNA on the nontemplate strand.
    Ramiro AR; Stavropoulos P; Jankovic M; Nussenzweig MC
    Nat Immunol; 2003 May; 4(5):452-6. PubMed ID: 12692548
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A source of the single-stranded DNA substrate for activation-induced deaminase during somatic hypermutation.
    Wang X; Fan M; Kalis S; Wei L; Scharff MD
    Nat Commun; 2014 Jun; 5():4137. PubMed ID: 24923561
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Detection of chromatin-associated single-stranded DNA in regions targeted for somatic hypermutation.
    Ronai D; Iglesias-Ussel MD; Fan M; Li Z; Martin A; Scharff MD
    J Exp Med; 2007 Jan; 204(1):181-90. PubMed ID: 17227912
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Replication protein A interacts with AID to promote deamination of somatic hypermutation targets.
    Chaudhuri J; Khuong C; Alt FW
    Nature; 2004 Aug; 430(7003):992-8. PubMed ID: 15273694
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Noncoding RNA transcription targets AID to divergently transcribed loci in B cells.
    Pefanis E; Wang J; Rothschild G; Lim J; Chao J; Rabadan R; Economides AN; Basu U
    Nature; 2014 Oct; 514(7522):389-93. PubMed ID: 25119026
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Activation-induced cytidine deaminase can target multiple topologies of double-stranded DNA in a transcription-independent manner.
    Branton SA; Ghorbani A; Bolt BN; Fifield H; Berghuis LM; Larijani M
    FASEB J; 2020 Jul; 34(7):9245-9268. PubMed ID: 32437054
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation.
    Pham P; Bransteitter R; Petruska J; Goodman MF
    Nature; 2003 Jul; 424(6944):103-7. PubMed ID: 12819663
    [TBL] [Abstract][Full Text] [Related]  

  • 10. R-Loop Depletion by Over-expressed RNase H1 in Mouse B Cells Increases Activation-Induced Deaminase Access to the Transcribed Strand without Altering Frequency of Isotype Switching.
    Maul RW; Chon H; Sakhuja K; Cerritelli SM; Gugliotti LA; Gearhart PJ; Crouch RJ
    J Mol Biol; 2017 Oct; 429(21):3255-3263. PubMed ID: 28065739
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Activation-induced deoxycytidine deaminase (AID) co-transcriptional scanning at single-molecule resolution.
    Senavirathne G; Bertram JG; Jaszczur M; Chaurasiya KR; Pham P; Mak CH; Goodman MF; Rueda D
    Nat Commun; 2015 Dec; 6():10209. PubMed ID: 26681117
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Single-stranded DNA structure and positional context of the target cytidine determine the enzymatic efficiency of AID.
    Larijani M; Martin A
    Mol Cell Biol; 2007 Dec; 27(23):8038-48. PubMed ID: 17893327
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Methylation protects cytidines from AID-mediated deamination.
    Larijani M; Frieder D; Sonbuchner TM; Bransteitter R; Goodman MF; Bouhassira EE; Scharff MD; Martin A
    Mol Immunol; 2005 Mar; 42(5):599-604. PubMed ID: 15607819
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Activation-induced deaminase: controversies and open questions.
    Barreto VM; Ramiro AR; Nussenzweig MC
    Trends Immunol; 2005 Feb; 26(2):90-6. PubMed ID: 15668124
    [No Abstract]   [Full Text] [Related]  

  • 15. The AID antibody diversification enzyme is regulated by protein kinase A phosphorylation.
    Basu U; Chaudhuri J; Alpert C; Dutt S; Ranganath S; Li G; Schrum JP; Manis JP; Alt FW
    Nature; 2005 Nov; 438(7067):508-11. PubMed ID: 16251902
    [TBL] [Abstract][Full Text] [Related]  

  • 16. DNA/RNA hybrid substrates modulate the catalytic activity of purified AID.
    Abdouni HS; King JJ; Ghorbani A; Fifield H; Berghuis L; Larijani M
    Mol Immunol; 2018 Jan; 93():94-106. PubMed ID: 29161581
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Activation-induced cytidine deaminase deaminates deoxycytidine on single-stranded DNA but requires the action of RNase.
    Bransteitter R; Pham P; Scharff MD; Goodman MF
    Proc Natl Acad Sci U S A; 2003 Apr; 100(7):4102-7. PubMed ID: 12651944
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A licensing step links AID to transcription elongation for mutagenesis in B cells.
    Methot SP; Litzler LC; Subramani PG; Eranki AK; Fifield H; Patenaude AM; Gilmore JC; Santiago GE; Bagci H; Côté JF; Larijani M; Verdun RE; Di Noia JM
    Nat Commun; 2018 Mar; 9(1):1248. PubMed ID: 29593215
    [TBL] [Abstract][Full Text] [Related]  

  • 19. AID mutates E. coli suggesting a DNA deamination mechanism for antibody diversification.
    Petersen-Mahrt SK; Harris RS; Neuberger MS
    Nature; 2002 Jul; 418(6893):99-103. PubMed ID: 12097915
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The regulation of somatic hypermutation.
    Besmer E; Gourzi P; Papavasiliou FN
    Curr Opin Immunol; 2004 Apr; 16(2):241-5. PubMed ID: 15023419
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.