BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

165 related articles for article (PubMed ID: 22383620)

  • 1. Using comparative genomics for inquiry-based learning to dissect virulence of Escherichia coli O157:H7 and Yersinia pestis.
    Baumler DJ; Banta LM; Hung KF; Schwarz JA; Cabot EL; Glasner JD; Perna NT
    CBE Life Sci Educ; 2012; 11(1):81-93. PubMed ID: 22383620
    [TBL] [Abstract][Full Text] [Related]  

  • 2. In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence.
    Laing CR; Buchanan C; Taboada EN; Zhang Y; Karmali MA; Thomas JE; Gannon VP
    BMC Genomics; 2009 Jun; 10():287. PubMed ID: 19563677
    [TBL] [Abstract][Full Text] [Related]  

  • 3. [Study on an inquiry-based teaching case in genomics curriculum: identifying virulence factors of Escherichia coli by using comparative genomics].
    Zhou JD; Li YD
    Yi Chuan; 2015 Feb; 37(2):214-218. PubMed ID: 25665648
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparative genomics reveals structural and functional features specific to the genome of a foodborne Escherichia coli O157:H7.
    Sharma VK; Akavaram S; Schaut RG; Bayles DO
    BMC Genomics; 2019 Mar; 20(1):196. PubMed ID: 30849935
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.
    Hayashi T; Makino K; Ohnishi M; Kurokawa K; Ishii K; Yokoyama K; Han CG; Ohtsubo E; Nakayama K; Murata T; Tanaka M; Tobe T; Iida T; Takami H; Honda T; Sasakawa C; Ogasawara N; Yasunaga T; Kuhara S; Shiba T; Hattori M; Shinagawa H
    DNA Res; 2001 Feb; 8(1):11-22. PubMed ID: 11258796
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli.
    Ogura Y; Ooka T; Iguchi A; Toh H; Asadulghani M; Oshima K; Kodama T; Abe H; Nakayama K; Kurokawa K; Tobe T; Hattori M; Hayashi T
    Proc Natl Acad Sci U S A; 2009 Oct; 106(42):17939-44. PubMed ID: 19815525
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence.
    Kulasekara BR; Jacobs M; Zhou Y; Wu Z; Sims E; Saenphimmachak C; Rohmer L; Ritchie JM; Radey M; McKevitt M; Freeman TL; Hayden H; Haugen E; Gillett W; Fong C; Chang J; Beskhlebnaya V; Waldor MK; Samadpour M; Whittam TS; Kaul R; Brittnacher M; Miller SI
    Infect Immun; 2009 Sep; 77(9):3713-21. PubMed ID: 19564389
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient
    Luhmann N; Doerr D; Chauve C
    Microb Genom; 2017 Sep; 3(9):e000123. PubMed ID: 29114402
    [No Abstract]   [Full Text] [Related]  

  • 9. Inferences from whole-genome sequences of bacterial pathogens.
    Whittam TS; Bumbaugh AC
    Curr Opin Genet Dev; 2002 Dec; 12(6):719-25. PubMed ID: 12433587
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Whole genome shotgun sequencing revealed highly polymorphic genome regions and genes in Escherichia coli O157:H7 isolates collected from a single feedlot.
    Gao X; Yang X; Noll L; Shi X; Worley J; Allard M; Brown E; Nagaraja TG; Meng J
    PLoS One; 2018; 13(8):e0202775. PubMed ID: 30153286
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Microarray analysis and draft genomes of two Escherichia coli O157:H7 lineage II cattle isolates FRIK966 and FRIK2000 investigating lack of Shiga toxin expression.
    Dowd SE; Crippen TL; Sun Y; Gontcharova V; Youn E; Muthaiyan A; Wolcott RD; Callaway TR; Ricke SC
    Foodborne Pathog Dis; 2010 Jul; 7(7):763-73. PubMed ID: 20156085
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genome evolution in major Escherichia coli O157:H7 lineages.
    Zhang Y; Laing C; Steele M; Ziebell K; Johnson R; Benson AK; Taboada E; Gannon VP
    BMC Genomics; 2007 May; 8():121. PubMed ID: 17506902
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Yersinia pestis strains from Latvia show depletion of the pla virulence gene at the end of the second plague pandemic.
    Susat J; Bonczarowska JH; Pētersone-Gordina E; Immel A; Nebel A; Gerhards G; Krause-Kyora B
    Sci Rep; 2020 Sep; 10(1):14628. PubMed ID: 32884081
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Analysis of environmental Escherichia coli isolates for virulence genes using the TaqMan PCR system.
    Davis KC; Nakatsu CH; Turco R; Weagant SD; Bhunia AK
    J Appl Microbiol; 2003; 95(3):612-20. PubMed ID: 12911710
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparative genomic analysis of a multiple antimicrobial resistant enterotoxigenic E. coli O157 lineage from Australian pigs.
    Wyrsch E; Roy Chowdhury P; Abraham S; Santos J; Darling AE; Charles IG; Chapman TA; Djordjevic SP
    BMC Genomics; 2015 Mar; 16(1):165. PubMed ID: 25888127
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genome sequencing and comparative genomics of enterohemorrhagic Escherichia coli O145:H25 and O145:H28 reveal distinct evolutionary paths and marked variations in traits associated with virulence & colonization.
    Lorenz SC; Gonzalez-Escalona N; Kotewicz ML; Fischer M; Kase JA
    BMC Microbiol; 2017 Aug; 17(1):183. PubMed ID: 28830351
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Characterization of the pathogenome and phylogenomic classification of enteropathogenic Escherichia coli of the O157:non-H7 serotypes.
    Sanjar F; Rusconi B; Hazen TH; Koenig SS; Mammel MK; Feng PC; Rasko DA; Eppinger M
    Pathog Dis; 2015 Jul; 73(5):. PubMed ID: 25962987
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.
    Perna NT; Plunkett G; Burland V; Mau B; Glasner JD; Rose DJ; Mayhew GF; Evans PS; Gregor J; Kirkpatrick HA; Pósfai G; Hackett J; Klink S; Boutin A; Shao Y; Miller L; Grotbeck EJ; Davis NW; Lim A; Dimalanta ET; Potamousis KD; Apodaca J; Anantharaman TS; Lin J; Yen G; Schwartz DC; Welch RA; Blattner FR
    Nature; 2001 Jan; 409(6819):529-33. PubMed ID: 11206551
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Visualization of pathogenicity regions in bacteria.
    Friis C; Jensen LJ; Ussery DW
    Genetica; 2000; 108(1):47-51. PubMed ID: 11145420
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Prediction of pathogenicity islands in enterohemorrhagic Escherichia coli O157:H7 using genomic barcodes.
    Wang G; Zhou F; Olman V; Li F; Xu Y
    FEBS Lett; 2010 Jan; 584(1):194-8. PubMed ID: 19941858
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.