These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
253 related articles for article (PubMed ID: 22420977)
1. High-throughput subtomogram alignment and classification by Fourier space constrained fast volumetric matching. Xu M; Beck M; Alber F J Struct Biol; 2012 May; 178(2):152-64. PubMed ID: 22420977 [TBL] [Abstract][Full Text] [Related]
2. Automated target segmentation and real space fast alignment methods for high-throughput classification and averaging of crowded cryo-electron subtomograms. Xu M; Alber F Bioinformatics; 2013 Jul; 29(13):i274-82. PubMed ID: 23812994 [TBL] [Abstract][Full Text] [Related]
3. Fast and accurate reference-free alignment of subtomograms. Chen Y; Pfeffer S; Hrabe T; Schuller JM; Förster F J Struct Biol; 2013 Jun; 182(3):235-45. PubMed ID: 23523719 [TBL] [Abstract][Full Text] [Related]
4. Fine-grained alignment of cryo-electron subtomograms based on MPI parallel optimization. Lü Y; Zeng X; Zhao X; Li S; Li H; Gao X; Xu M BMC Bioinformatics; 2019 Aug; 20(1):443. PubMed ID: 31455212 [TBL] [Abstract][Full Text] [Related]
5. TomoMiner and TomoMinerCloud: A Software Platform for Large-Scale Subtomogram Structural Analysis. Frazier Z; Xu M; Alber F Structure; 2017 Jun; 25(6):951-961.e2. PubMed ID: 28552576 [TBL] [Abstract][Full Text] [Related]
6. Autofocused 3D classification of cryoelectron subtomograms. Chen Y; Pfeffer S; Fernández JJ; Sorzano CO; Förster F Structure; 2014 Oct; 22(10):1528-37. PubMed ID: 25242455 [TBL] [Abstract][Full Text] [Related]
7. Assessment of scoring functions to rank the quality of 3D subtomogram clusters from cryo-electron tomography. Singla J; White KL; Stevens RC; Alber F J Struct Biol; 2021 Jun; 213(2):107727. PubMed ID: 33753204 [TBL] [Abstract][Full Text] [Related]
8. An integration of fast alignment and maximum-likelihood methods for electron subtomogram averaging and classification. Zhao Y; Zeng X; Guo Q; Xu M Bioinformatics; 2018 Jul; 34(13):i227-i236. PubMed ID: 29949977 [TBL] [Abstract][Full Text] [Related]
9. Cryo-Electron Tomography and Subtomogram Averaging. Wan W; Briggs JA Methods Enzymol; 2016; 579():329-67. PubMed ID: 27572733 [TBL] [Abstract][Full Text] [Related]
10. emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging. Himes BA; Zhang P Nat Methods; 2018 Nov; 15(11):955-961. PubMed ID: 30349041 [TBL] [Abstract][Full Text] [Related]
11. High precision alignment of cryo-electron subtomograms through gradient-based parallel optimization. Xu M; Alber F BMC Syst Biol; 2012; 6 Suppl 1(Suppl 1):S18. PubMed ID: 23046491 [TBL] [Abstract][Full Text] [Related]
13. Current data processing strategies for cryo-electron tomography and subtomogram averaging. Pyle E; Zanetti G Biochem J; 2021 May; 478(10):1827-1845. PubMed ID: 34003255 [TBL] [Abstract][Full Text] [Related]
14. A simple and fast approach for missing-wedge invariant classification of subtomograms extracted from filamentous structures. Obbineni JM; Yamamoto R; Ishikawa T J Struct Biol; 2017 Feb; 197(2):145-154. PubMed ID: 27520596 [TBL] [Abstract][Full Text] [Related]
15. Quantifying resolution limiting factors in subtomogram averaged cryo-electron tomography using simulations. Voortman LM; Vulović M; Maletta M; Voigt A; Franken EM; Simonetti A; Peters PJ; van Vliet LJ; Rieger B J Struct Biol; 2014 Aug; 187(2):103-111. PubMed ID: 24998892 [TBL] [Abstract][Full Text] [Related]
16. PyTom: a python-based toolbox for localization of macromolecules in cryo-electron tomograms and subtomogram analysis. Hrabe T; Chen Y; Pfeffer S; Cuellar LK; Mangold AV; Förster F J Struct Biol; 2012 May; 178(2):177-88. PubMed ID: 22193517 [TBL] [Abstract][Full Text] [Related]
17. A feature-guided, focused 3D signal permutation method for subtomogram averaging. Peters JJ; Leitz J; Guo Q; Beck F; Baumeister W; Brunger AT J Struct Biol; 2022 Jun; 214(2):107851. PubMed ID: 35346811 [TBL] [Abstract][Full Text] [Related]
18. STOPGAP: an open-source package for template matching, subtomogram alignment and classification. Wan W; Khavnekar S; Wagner J Acta Crystallogr D Struct Biol; 2024 May; 80(Pt 5):336-349. PubMed ID: 38606666 [TBL] [Abstract][Full Text] [Related]
19. Optimal and fast rotational alignment of volumes with missing data in Fourier space. Shatsky M; Arbelaez P; Glaeser RM; Brenner SE J Struct Biol; 2013 Nov; 184(2):345-7. PubMed ID: 23994045 [TBL] [Abstract][Full Text] [Related]
20. Implementation of a cryo-electron tomography tilt-scheme optimized for high resolution subtomogram averaging. Hagen WJH; Wan W; Briggs JAG J Struct Biol; 2017 Feb; 197(2):191-198. PubMed ID: 27313000 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]