These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

99 related articles for article (PubMed ID: 22461785)

  • 21. Comparative studies of de novo assembly tools for next-generation sequencing technologies.
    Lin Y; Li J; Shen H; Zhang L; Papasian CJ; Deng HW
    Bioinformatics; 2011 Aug; 27(15):2031-7. PubMed ID: 21636596
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Evaluating de Bruijn graph assemblers on 454 transcriptomic data.
    Ren X; Liu T; Dong J; Sun L; Yang J; Zhu Y; Jin Q
    PLoS One; 2012; 7(12):e51188. PubMed ID: 23236450
    [TBL] [Abstract][Full Text] [Related]  

  • 23. From Short Reads to Chromosome-Scale Genome Assemblies.
    Fletcher K; Michelmore R
    Methods Mol Biol; 2018; 1848():151-197. PubMed ID: 30182236
    [TBL] [Abstract][Full Text] [Related]  

  • 24. SeqAssist: a novel toolkit for preliminary analysis of next-generation sequencing data.
    Peng Y; Maxwell AS; Barker ND; Laird JG; Kennedy AJ; Wang N; Zhang C; Gong P
    BMC Bioinformatics; 2014; 15 Suppl 11(Suppl 11):S10. PubMed ID: 25349885
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Scheduling-Guided Automatic Processing of Massive Hyperspectral Image Classification on Cloud Computing Architectures.
    Wu Z; Sun J; Zhang Y; Zhu Y; Li J; Plaza A; Benediktsson JA; Wei Z
    IEEE Trans Cybern; 2021 Jul; 51(7):3588-3601. PubMed ID: 33119530
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Optimizing performance of GATK workflows using Apache Arrow In-Memory data framework.
    Ahmad T; Ahmed N; Al-Ars Z; Hofstee HP
    BMC Genomics; 2020 Nov; 21(Suppl 10):683. PubMed ID: 33208101
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Hybrid Symbiotic Organisms Search Optimization Algorithm for Scheduling of Tasks on Cloud Computing Environment.
    Abdullahi M; Ngadi MA
    PLoS One; 2016; 11(6):e0158229. PubMed ID: 27348127
    [TBL] [Abstract][Full Text] [Related]  

  • 28. NGS-QCbox and Raspberry for Parallel, Automated and Rapid Quality Control Analysis of Large-Scale Next Generation Sequencing (Illumina) Data.
    Katta MA; Khan AW; Doddamani D; Thudi M; Varshney RK
    PLoS One; 2015; 10(10):e0139868. PubMed ID: 26460497
    [TBL] [Abstract][Full Text] [Related]  

  • 29. The complex task of choosing a de novo assembly: lessons from fungal genomes.
    Gallo JE; Muñoz JF; Misas E; McEwen JG; Clay OK
    Comput Biol Chem; 2014 Dec; 53 Pt A():97-107. PubMed ID: 25262360
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Building a Science Gateway For Processing and Modeling Sequencing Data Via Apache Airavata.
    Wang Z; Christie MA; Abeysinghe E; Chu T; Marru S; Pierce M; Danko CG
    Pract Exp Adv Res Comput 2018 (2018); 2018 Jul; 2018():. PubMed ID: 31598610
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Sort-Mid tasks scheduling algorithm in grid computing.
    Reda NM; Tawfik A; Marzok MA; Khamis SM
    J Adv Res; 2015 Nov; 6(6):987-93. PubMed ID: 26644937
    [TBL] [Abstract][Full Text] [Related]  

  • 32. De novo transcriptome assembly with ABySS.
    Birol I; Jackman SD; Nielsen CB; Qian JQ; Varhol R; Stazyk G; Morin RD; Zhao Y; Hirst M; Schein JE; Horsman DE; Connors JM; Gascoyne RD; Marra MA; Jones SJ
    Bioinformatics; 2009 Nov; 25(21):2872-7. PubMed ID: 19528083
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Development and comparison of migration paths for smart grids using two case studies.
    Flore A; Marx Gómez J
    Heliyon; 2020 Sep; 6(9):e04913. PubMed ID: 32984609
    [TBL] [Abstract][Full Text] [Related]  

  • 34. TIGER: tiled iterative genome assembler.
    Wu XL; Heo Y; El Hajj I; Hwu WM; Chen D; Ma J
    BMC Bioinformatics; 2012; 13 Suppl 19(Suppl 19):S18. PubMed ID: 23281792
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Comparative performance of transcriptome assembly methods for non-model organisms.
    Huang X; Chen XG; Armbruster PA
    BMC Genomics; 2016 Jul; 17():523. PubMed ID: 27464550
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Fault tolerance in computational grids: perspectives, challenges, and issues.
    Haider S; Nazir B
    Springerplus; 2016; 5(1):1991. PubMed ID: 27933247
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Solving flexible job shop scheduling problems with transportation time based on improved genetic algorithm.
    Zhang GH; Sun JH; Liu X; Wang GD; Yang YY
    Math Biosci Eng; 2019 Feb; 16(3):1334-1347. PubMed ID: 30947423
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Apollo: a sequencing-technology-independent, scalable and accurate assembly polishing algorithm.
    Firtina C; Kim JS; Alser M; Senol Cali D; Cicek AE; Alkan C; Mutlu O
    Bioinformatics; 2020 Jun; 36(12):3669-3679. PubMed ID: 32167530
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Closha: bioinformatics workflow system for the analysis of massive sequencing data.
    Ko G; Kim PG; Yoon J; Han G; Park SJ; Song W; Lee B
    BMC Bioinformatics; 2018 Feb; 19(Suppl 1):43. PubMed ID: 29504905
    [TBL] [Abstract][Full Text] [Related]  

  • 40. A pilot study for channel catfish whole genome sequencing and de novo assembly.
    Jiang Y; Lu J; Peatman E; Kucuktas H; Liu S; Wang S; Sun F; Liu Z
    BMC Genomics; 2011 Dec; 12():629. PubMed ID: 22192763
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 5.