701 related articles for article (PubMed ID: 22466170)
1. Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk.
Brinkman AB; Gu H; Bartels SJ; Zhang Y; Matarese F; Simmer F; Marks H; Bock C; Gnirke A; Meissner A; Stunnenberg HG
Genome Res; 2012 Jun; 22(6):1128-38. PubMed ID: 22466170
[TBL] [Abstract][Full Text] [Related]
2. Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA.
Statham AL; Robinson MD; Song JZ; Coolen MW; Stirzaker C; Clark SJ
Genome Res; 2012 Jun; 22(6):1120-7. PubMed ID: 22466171
[TBL] [Abstract][Full Text] [Related]
3. Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos.
Liu X; Wang C; Liu W; Li J; Li C; Kou X; Chen J; Zhao Y; Gao H; Wang H; Zhang Y; Gao Y; Gao S
Nature; 2016 Sep; 537(7621):558-562. PubMed ID: 27626379
[TBL] [Abstract][Full Text] [Related]
4. H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome.
Pauler FM; Sloane MA; Huang R; Regha K; Koerner MV; Tamir I; Sommer A; Aszodi A; Jenuwein T; Barlow DP
Genome Res; 2009 Feb; 19(2):221-33. PubMed ID: 19047520
[TBL] [Abstract][Full Text] [Related]
5. Genome-wide epigenetic analysis of human pluripotent stem cells by ChIP and ChIP-Seq.
Hitchler MJ; Rice JC
Methods Mol Biol; 2011; 767():253-67. PubMed ID: 21822881
[TBL] [Abstract][Full Text] [Related]
6. reChIP-seq reveals widespread bivalency of H3K4me3 and H3K27me3 in CD4(+) memory T cells.
Kinkley S; Helmuth J; Polansky JK; Dunkel I; Gasparoni G; Fröhler S; Chen W; Walter J; Hamann A; Chung HR
Nat Commun; 2016 Aug; 7():12514. PubMed ID: 27530917
[TBL] [Abstract][Full Text] [Related]
7. Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells.
Gao F; Ji G; Gao Z; Han X; Ye M; Yuan Z; Luo H; Huang X; Natarajan K; Wang J; Yang H; Zhang X
Genomics; 2014; 103(2-3):204-10. PubMed ID: 24407023
[TBL] [Abstract][Full Text] [Related]
8. DNA methylation and repressive histones in the promoters of PD-1, CTLA-4, TIM-3, LAG-3, TIGIT, PD-L1, and galectin-9 genes in human colorectal cancer.
Sasidharan Nair V; Toor SM; Taha RZ; Shaath H; Elkord E
Clin Epigenetics; 2018 Aug; 10(1):104. PubMed ID: 30081950
[TBL] [Abstract][Full Text] [Related]
9. Genome-wide analysis of histone H3 lysine 27 trimethylation by ChIP-chip in gastric cancer patients.
Zhang L; Zhong K; Dai Y; Zhou H
J Gastroenterol; 2009; 44(4):305-12. PubMed ID: 19267258
[TBL] [Abstract][Full Text] [Related]
10. Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos.
Lindeman LC; Winata CL; Aanes H; Mathavan S; Alestrom P; Collas P
Int J Dev Biol; 2010; 54(5):803-13. PubMed ID: 20336603
[TBL] [Abstract][Full Text] [Related]
11. Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications.
Harris RA; Wang T; Coarfa C; Nagarajan RP; Hong C; Downey SL; Johnson BE; Fouse SD; Delaney A; Zhao Y; Olshen A; Ballinger T; Zhou X; Forsberg KJ; Gu J; Echipare L; O'Geen H; Lister R; Pelizzola M; Xi Y; Epstein CB; Bernstein BE; Hawkins RD; Ren B; Chung WY; Gu H; Bock C; Gnirke A; Zhang MQ; Haussler D; Ecker JR; Li W; Farnham PJ; Waterland RA; Meissner A; Marra MA; Hirst M; Milosavljevic A; Costello JF
Nat Biotechnol; 2010 Oct; 28(10):1097-105. PubMed ID: 20852635
[TBL] [Abstract][Full Text] [Related]
12. Coordinate regulation of DNA methylation and H3K27me3 in mouse embryonic stem cells.
Hagarman JA; Motley MP; Kristjansdottir K; Soloway PD
PLoS One; 2013; 8(1):e53880. PubMed ID: 23326524
[TBL] [Abstract][Full Text] [Related]
13. The presence of RNA polymerase II, active or stalled, predicts epigenetic fate of promoter CpG islands.
Takeshima H; Yamashita S; Shimazu T; Niwa T; Ushijima T
Genome Res; 2009 Nov; 19(11):1974-82. PubMed ID: 19652013
[TBL] [Abstract][Full Text] [Related]
14. Epigenetic modifications and mRNA levels of the imprinted gene Grb10 in serially passaged fibroblast cells.
Yao J; Huang Y; Huang R; Shi R; Chen P; Zhu B; Li M; Jiang X; Zheng M; Jiang Y; Yang X
Biochimie; 2012 Dec; 94(12):2699-705. PubMed ID: 22971350
[TBL] [Abstract][Full Text] [Related]
15. Genome-wide analysis of histone modifications by ChIP-chip to identify silenced genes in gastric cancer.
Zhu X; Liu J; Xu X; Zhang C; Dai D
Oncol Rep; 2015 May; 33(5):2567-74. PubMed ID: 25738530
[TBL] [Abstract][Full Text] [Related]
16. Differences among brain tumor stem cell types and fetal neural stem cells in focal regions of histone modifications and DNA methylation, broad regions of modifications, and bivalent promoters.
Yoo S; Bieda MC
BMC Genomics; 2014 Aug; 15(1):724. PubMed ID: 25163646
[TBL] [Abstract][Full Text] [Related]
17. Genomic architecture of histone 3 lysine 27 trimethylation during late ovine skeletal muscle development.
Byrne K; McWilliam S; Vuocolo T; Gondro C; Cockett NE; Tellam RL
Anim Genet; 2014 Jun; 45(3):427-38. PubMed ID: 24673416
[TBL] [Abstract][Full Text] [Related]
18. Combined chromatin immunoprecipitation and bisulfite methylation sequencing analysis.
Li Y; Tollefsbol TO
Methods Mol Biol; 2011; 791():239-51. PubMed ID: 21913084
[TBL] [Abstract][Full Text] [Related]
19. Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia.
Adriaens ME; Prickaerts P; Chan-Seng-Yue M; van den Beucken T; Dahlmans VEH; Eijssen LM; Beck T; Wouters BG; Voncken JW; Evelo CTA
Epigenetics Chromatin; 2016; 9():48. PubMed ID: 27822313
[TBL] [Abstract][Full Text] [Related]
20. Defining a chromatin pattern that characterizes DNA-hypermethylated genes in colon cancer cells.
McGarvey KM; Van Neste L; Cope L; Ohm JE; Herman JG; Van Criekinge W; Schuebel KE; Baylin SB
Cancer Res; 2008 Jul; 68(14):5753-9. PubMed ID: 18632628
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
