These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
534 related articles for article (PubMed ID: 22479199)
21. Enrichment of rare codons at 5' ends of genes is a spandrel caused by evolutionary sequence turnover and does not improve translation. Sejour R; Leatherwood J; Yurovsky A; Futcher B Elife; 2024 Jul; 12():. PubMed ID: 39008347 [TBL] [Abstract][Full Text] [Related]
22. The combined influence of codon composition and tRNA copy number regulates translational efficiency by influencing synonymous nucleotide substitution. Victor MP; Acharya D; Chakraborty S; Ghosh TC Gene; 2020 Jun; 745():144640. PubMed ID: 32247037 [TBL] [Abstract][Full Text] [Related]
23. Codon usage revisited: Lack of correlation between codon usage and the number of tRNA genes in enterobacteria. Rojas J; Castillo G; Leiva LE; Elgamal S; Orellana O; Ibba M; Katz A Biochem Biophys Res Commun; 2018 Aug; 502(4):450-455. PubMed ID: 29859934 [TBL] [Abstract][Full Text] [Related]
24. Modelling the efficiency of codon-tRNA interactions based on codon usage bias. Sabi R; Tuller T DNA Res; 2014 Oct; 21(5):511-26. PubMed ID: 24906480 [TBL] [Abstract][Full Text] [Related]
25. The fitness consequences of synonymous mutations in Escherichia coli: Experimental evidence for a pleiotropic effect of translational selection. Ballard A; Bieniek S; Carlini DB Gene; 2019 Apr; 694():111-120. PubMed ID: 30738968 [TBL] [Abstract][Full Text] [Related]
26. Adaptation of codon and amino acid use for translational functions in highly expressed cricket genes. Whittle CA; Kulkarni A; Chung N; Extavour CG BMC Genomics; 2021 Apr; 22(1):234. PubMed ID: 33823803 [TBL] [Abstract][Full Text] [Related]
27. Positive selection for unpreferred codon usage in eukaryotic genomes. Neafsey DE; Galagan JE BMC Evol Biol; 2007 Jul; 7():119. PubMed ID: 17640368 [TBL] [Abstract][Full Text] [Related]
28. Measurement of average decoding rates of the 61 sense codons in vivo. Gardin J; Yeasmin R; Yurovsky A; Cai Y; Skiena S; Futcher B Elife; 2014 Oct; 3():. PubMed ID: 25347064 [TBL] [Abstract][Full Text] [Related]
29. Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes. Grosjean H; Fiers W Gene; 1982 Jun; 18(3):199-209. PubMed ID: 6751939 [TBL] [Abstract][Full Text] [Related]
30. Combining Sense and Nonsense Codon Reassignment for Site-Selective Protein Modification with Unnatural Amino Acids. Cui Z; Mureev S; Polinkovsky ME; Tnimov Z; Guo Z; Durek T; Jones A; Alexandrov K ACS Synth Biol; 2017 Mar; 6(3):535-544. PubMed ID: 27966891 [TBL] [Abstract][Full Text] [Related]
31. Forces that influence the evolution of codon bias. Sharp PM; Emery LR; Zeng K Philos Trans R Soc Lond B Biol Sci; 2010 Apr; 365(1544):1203-12. PubMed ID: 20308095 [TBL] [Abstract][Full Text] [Related]
33. Reinvestigating the codon and amino acid usage of S. cerevisiae genome: a new insight from protein secondary structure analysis. Kahali B; Basak S; Ghosh TC Biochem Biophys Res Commun; 2007 Mar; 354(3):693-9. PubMed ID: 17258174 [TBL] [Abstract][Full Text] [Related]
34. Gene expression levels are correlated with synonymous codon usage, amino acid composition, and gene architecture in the red flour beetle, Tribolium castaneum. Williford A; Demuth JP Mol Biol Evol; 2012 Dec; 29(12):3755-66. PubMed ID: 22826459 [TBL] [Abstract][Full Text] [Related]
36. Translation rates of individual codons are not correlated with tRNA abundances or with frequencies of utilization in Escherichia coli. Bonekamp F; Dalbøge H; Christensen T; Jensen KF J Bacteriol; 1989 Nov; 171(11):5812-6. PubMed ID: 2509420 [TBL] [Abstract][Full Text] [Related]
37. Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation. Pop C; Rouskin S; Ingolia NT; Han L; Phizicky EM; Weissman JS; Koller D Mol Syst Biol; 2014 Dec; 10(12):770. PubMed ID: 25538139 [TBL] [Abstract][Full Text] [Related]
38. Why are translationally sub-optimal synonymous codons used in Escherichia coli? Smith NG; Eyre-Walker A J Mol Evol; 2001 Sep; 53(3):225-36. PubMed ID: 11523009 [TBL] [Abstract][Full Text] [Related]
39. Expansion of the genetic code through reassignment of redundant sense codons using fully modified tRNA. McFeely CAL; Dods KK; Patel SS; Hartman MCT Nucleic Acids Res; 2022 Oct; 50(19):11374-11386. PubMed ID: 36300637 [TBL] [Abstract][Full Text] [Related]
40. Amino acid composition is correlated with protein abundance in Escherichia coli: can this be due to optimization of translational efficiency? Shpaer EG Protein Seq Data Anal; 1989 Feb; 2(2):107-10. PubMed ID: 2652142 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]