298 related articles for article (PubMed ID: 22479422)
1. Bagging statistical network inference from large-scale gene expression data.
de Matos Simoes R; Emmert-Streib F
PLoS One; 2012; 7(3):e33624. PubMed ID: 22479422
[TBL] [Abstract][Full Text] [Related]
2. Structural influence of gene networks on their inference: analysis of C3NET.
Altay G; Emmert-Streib F
Biol Direct; 2011 Jun; 6():31. PubMed ID: 21696592
[TBL] [Abstract][Full Text] [Related]
3. SIN-KNO: A method of gene regulatory network inference using single-cell transcription and gene knockout data.
Wang H; Lian Y; Li C; Ma Y; Yan Z; Dong C
J Bioinform Comput Biol; 2019 Dec; 17(6):1950035. PubMed ID: 32019417
[TBL] [Abstract][Full Text] [Related]
4. MICRAT: a novel algorithm for inferring gene regulatory networks using time series gene expression data.
Yang B; Xu Y; Maxwell A; Koh W; Gong P; Zhang C
BMC Syst Biol; 2018 Dec; 12(Suppl 7):115. PubMed ID: 30547796
[TBL] [Abstract][Full Text] [Related]
5. B-cell lymphoma gene regulatory networks: biological consistency among inference methods.
de Matos Simoes R; Dehmer M; Emmert-Streib F
Front Genet; 2013; 4():281. PubMed ID: 24379827
[TBL] [Abstract][Full Text] [Related]
6. A copula method for modeling directional dependence of genes.
Kim JM; Jung YS; Sungur EA; Han KH; Park C; Sohn I
BMC Bioinformatics; 2008 May; 9():225. PubMed ID: 18447957
[TBL] [Abstract][Full Text] [Related]
7. Cross-platform microarray data normalisation for regulatory network inference.
Sîrbu A; Ruskin HJ; Crane M
PLoS One; 2010 Nov; 5(11):e13822. PubMed ID: 21103045
[TBL] [Abstract][Full Text] [Related]
8. Inference of gene networks from gene expression time series using recurrent neural networks and sparse MAP estimation.
Chen CK
J Bioinform Comput Biol; 2018 Aug; 16(4):1850009. PubMed ID: 30051742
[TBL] [Abstract][Full Text] [Related]
9. PoLoBag: Polynomial Lasso Bagging for signed gene regulatory network inference from expression data.
Ghosh Roy G; Geard N; Verspoor K; He S
Bioinformatics; 2021 Jan; 36(21):5187-5193. PubMed ID: 32697830
[TBL] [Abstract][Full Text] [Related]
10. Time Delayed Causal Gene Regulatory Network Inference with Hidden Common Causes.
Lo LY; Wong ML; Lee KH; Leung KS
PLoS One; 2015; 10(9):e0138596. PubMed ID: 26394325
[TBL] [Abstract][Full Text] [Related]
11. Inferring the conservative causal core of gene regulatory networks.
Altay G; Emmert-Streib F
BMC Syst Biol; 2010 Sep; 4():132. PubMed ID: 20920161
[TBL] [Abstract][Full Text] [Related]
12. Ensemble inference and inferability of gene regulatory networks.
Ud-Dean SM; Gunawan R
PLoS One; 2014; 9(8):e103812. PubMed ID: 25093509
[TBL] [Abstract][Full Text] [Related]
13. Applying attractor dynamics to infer gene regulatory interactions involved in cellular differentiation.
Ghaffarizadeh A; Podgorski GJ; Flann NS
Biosystems; 2017 May; 155():29-41. PubMed ID: 28254369
[TBL] [Abstract][Full Text] [Related]
14. An improved Bayesian network method for reconstructing gene regulatory network based on candidate auto selection.
Xing L; Guo M; Liu X; Wang C; Wang L; Zhang Y
BMC Genomics; 2017 Nov; 18(Suppl 9):844. PubMed ID: 29219084
[TBL] [Abstract][Full Text] [Related]
15. Urothelial cancer gene regulatory networks inferred from large-scale RNAseq, Bead and Oligo gene expression data.
de Matos Simoes R; Dalleau S; Williamson KE; Emmert-Streib F
BMC Syst Biol; 2015 May; 9():21. PubMed ID: 25971253
[TBL] [Abstract][Full Text] [Related]
16. TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach.
Zoppoli P; Morganella S; Ceccarelli M
BMC Bioinformatics; 2010 Mar; 11():154. PubMed ID: 20338053
[TBL] [Abstract][Full Text] [Related]
17. Inferring orthologous gene regulatory networks using interspecies data fusion.
Penfold CA; Millar JB; Wild DL
Bioinformatics; 2015 Jun; 31(12):i97-105. PubMed ID: 26072515
[TBL] [Abstract][Full Text] [Related]
18. Supervised learning of gene-regulatory networks based on graph distance profiles of transcriptomics data.
Razaghi-Moghadam Z; Nikoloski Z
NPJ Syst Biol Appl; 2020 Jun; 6(1):21. PubMed ID: 32606380
[TBL] [Abstract][Full Text] [Related]
19. SILGGM: An extensive R package for efficient statistical inference in large-scale gene networks.
Zhang R; Ren Z; Chen W
PLoS Comput Biol; 2018 Aug; 14(8):e1006369. PubMed ID: 30102702
[TBL] [Abstract][Full Text] [Related]
20. Improvements in the reconstruction of time-varying gene regulatory networks: dynamic programming and regularization by information sharing among genes.
Grzegorczyk M; Husmeier D
Bioinformatics; 2011 Mar; 27(5):693-9. PubMed ID: 21177328
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
