308 related articles for article (PubMed ID: 22479570)
1. Exploring the switchgrass transcriptome using second-generation sequencing technology.
Wang Y; Zeng X; Iyer NJ; Bryant DW; Mockler TC; Mahalingam R
PLoS One; 2012; 7(3):e34225. PubMed ID: 22479570
[TBL] [Abstract][Full Text] [Related]
2. SNP discovery with EST and NextGen sequencing in switchgrass (Panicum virgatum L.).
Ersoz ES; Wright MH; Pangilinan JL; Sheehan MJ; Tobias C; Casler MD; Buckler ES; Costich DE
PLoS One; 2012; 7(9):e44112. PubMed ID: 23049744
[TBL] [Abstract][Full Text] [Related]
3. Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles.
Guo S; Liu J; Zheng Y; Huang M; Zhang H; Gong G; He H; Ren Y; Zhong S; Fei Z; Xu Y
BMC Genomics; 2011 Sep; 12():454. PubMed ID: 21936920
[TBL] [Abstract][Full Text] [Related]
4. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
[TBL] [Abstract][Full Text] [Related]
5. New genomic resources for switchgrass: a BAC library and comparative analysis of homoeologous genomic regions harboring bioenergy traits.
Saski CA; Li Z; Feltus FA; Luo H
BMC Genomics; 2011 Jul; 12():369. PubMed ID: 21767393
[TBL] [Abstract][Full Text] [Related]
6. Transcriptome analysis of extant cotton progenitors revealed tetraploidization and identified genome-specific single nucleotide polymorphism in diploid and allotetraploid cotton.
Guan X; Nah G; Song Q; Udall JA; Stelly DM; Chen ZJ
BMC Res Notes; 2014 Aug; 7():493. PubMed ID: 25099166
[TBL] [Abstract][Full Text] [Related]
7. Transcriptome de novo assembly from next-generation sequencing and comparative analyses in the hexaploid salt marsh species Spartina maritima and Spartina alterniflora (Poaceae).
Ferreira de Carvalho J; Poulain J; Da Silva C; Wincker P; Michon-Coudouel S; Dheilly A; Naquin D; Boutte J; Salmon A; Ainouche M
Heredity (Edinb); 2013 Feb; 110(2):181-93. PubMed ID: 23149455
[TBL] [Abstract][Full Text] [Related]
8. Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).
Zhang JY; Lee YC; Torres-Jerez I; Wang M; Yin Y; Chou WC; He J; Shen H; Srivastava AC; Pennacchio C; Lindquist E; Grimwood J; Schmutz J; Xu Y; Sharma M; Sharma R; Bartley LE; Ronald PC; Saha MC; Dixon RA; Tang Y; Udvardi MK
Plant J; 2013 Apr; 74(1):160-73. PubMed ID: 23289674
[TBL] [Abstract][Full Text] [Related]
9. Targeted mining of drought stress-responsive genes from EST resources in Cleistogenes songorica.
Zhang J; John UP; Wang Y; Li X; Gunawardana D; Polotnianka RM; Spangenberg GC; Nan Z
J Plant Physiol; 2011 Oct; 168(15):1844-51. PubMed ID: 21684035
[TBL] [Abstract][Full Text] [Related]
10. A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica.
Ueno S; Moriguchi Y; Uchiyama K; Ujino-Ihara T; Futamura N; Sakurai T; Shinohara K; Tsumura Y
BMC Genomics; 2012 Apr; 13():136. PubMed ID: 22507374
[TBL] [Abstract][Full Text] [Related]
11. A genome-wide survey of switchgrass genome structure and organization.
Sharma MK; Sharma R; Cao P; Jenkins J; Bartley LE; Qualls M; Grimwood J; Schmutz J; Rokhsar D; Ronald PC
PLoS One; 2012; 7(4):e33892. PubMed ID: 22511929
[TBL] [Abstract][Full Text] [Related]
12. Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery.
Kaur S; Cogan NO; Pembleton LW; Shinozuka M; Savin KW; Materne M; Forster JW
BMC Genomics; 2011 May; 12():265. PubMed ID: 21609489
[TBL] [Abstract][Full Text] [Related]
13. Whole transcriptome analysis using next-generation sequencing of model species Setaria viridis to support C4 photosynthesis research.
Xu J; Li Y; Ma X; Ding J; Wang K; Wang S; Tian Y; Zhang H; Zhu XG
Plant Mol Biol; 2013 Sep; 83(1-2):77-87. PubMed ID: 23512102
[TBL] [Abstract][Full Text] [Related]
14. Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol.
Lu F; Lipka AE; Glaubitz J; Elshire R; Cherney JH; Casler MD; Buckler ES; Costich DE
PLoS Genet; 2013; 9(1):e1003215. PubMed ID: 23349638
[TBL] [Abstract][Full Text] [Related]
15. Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery.
Parchman TL; Geist KS; Grahnen JA; Benkman CW; Buerkle CA
BMC Genomics; 2010 Mar; 11():180. PubMed ID: 20233449
[TBL] [Abstract][Full Text] [Related]
16. Identification, characterization, and gene expression analysis of nucleotide binding site (NB)-type resistance gene homologues in switchgrass.
Frazier TP; Palmer NA; Xie F; Tobias CM; Donze-Reiner TJ; Bombarely A; Childs KL; Shu S; Jenkins JW; Schmutz J; Zhang B; Sarath G; Zhao B
BMC Genomics; 2016 Nov; 17(1):892. PubMed ID: 27821048
[TBL] [Abstract][Full Text] [Related]
17. Characterization of Oncidium 'Gower Ramsey' transcriptomes using 454 GS-FLX pyrosequencing and their application to the identification of genes associated with flowering time.
Chang YY; Chu YW; Chen CW; Leu WM; Hsu HF; Yang CH
Plant Cell Physiol; 2011 Sep; 52(9):1532-45. PubMed ID: 21785129
[TBL] [Abstract][Full Text] [Related]
18. Transcriptome analysis in sheepgrass (Leymus chinensis): a dominant perennial grass of the Eurasian Steppe.
Chen S; Huang X; Yan X; Liang Y; Wang Y; Li X; Peng X; Ma X; Zhang L; Cai Y; Ma T; Cheng L; Qi D; Zheng H; Yang X; Li X; Liu G
PLoS One; 2013; 8(7):e67974. PubMed ID: 23861841
[TBL] [Abstract][Full Text] [Related]
19. Generation and analysis of expressed sequence tags in the extreme large genomes Lilium and Tulipa.
Shahin A; van Kaauwen M; Esselink D; Bargsten JW; van Tuyl JM; Visser RG; Arens P
BMC Genomics; 2012 Nov; 13():640. PubMed ID: 23167289
[TBL] [Abstract][Full Text] [Related]
20. Nucleotide polymorphism and copy number variant detection using exome capture and next-generation sequencing in the polyploid grass Panicum virgatum.
Evans J; Kim J; Childs KL; Vaillancourt B; Crisovan E; Nandety A; Gerhardt DJ; Richmond TA; Jeddeloh JA; Kaeppler SM; Casler MD; Buell CR
Plant J; 2014 Sep; 79(6):993-1008. PubMed ID: 24947485
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
