269 related articles for article (PubMed ID: 22500801)
1. Cooperative tertiary interaction network guides RNA folding.
Behrouzi R; Roh JH; Kilburn D; Briber RM; Woodson SA
Cell; 2012 Apr; 149(2):348-57. PubMed ID: 22500801
[TBL] [Abstract][Full Text] [Related]
2. Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme.
Rangan P; Masquida B; Westhof E; Woodson SA
Proc Natl Acad Sci U S A; 2003 Feb; 100(4):1574-9. PubMed ID: 12574513
[TBL] [Abstract][Full Text] [Related]
3. Secondary structure encodes a cooperative tertiary folding funnel in the Azoarcus ribozyme.
Mustoe AM; Al-Hashimi HM; Brooks CL
Nucleic Acids Res; 2016 Jan; 44(1):402-12. PubMed ID: 26481360
[TBL] [Abstract][Full Text] [Related]
4. Tertiary interactions determine the accuracy of RNA folding.
Chauhan S; Woodson SA
J Am Chem Soc; 2008 Jan; 130(4):1296-303. PubMed ID: 18179212
[TBL] [Abstract][Full Text] [Related]
5. Structural rearrangements linked to global folding pathways of the Azoarcus group I ribozyme.
Chauhan S; Behrouzi R; Rangan P; Woodson SA
J Mol Biol; 2009 Mar; 386(4):1167-78. PubMed ID: 19154736
[TBL] [Abstract][Full Text] [Related]
6. Effects of Preferential Counterion Interactions on the Specificity of RNA Folding.
Roh JH; Kilburn D; Behrouzi R; Sung W; Briber RM; Woodson SA
J Phys Chem Lett; 2018 Oct; 9(19):5726-5732. PubMed ID: 30211556
[TBL] [Abstract][Full Text] [Related]
7. Multistage collapse of a bacterial ribozyme observed by time-resolved small-angle X-ray scattering.
Roh JH; Guo L; Kilburn JD; Briber RM; Irving T; Woodson SA
J Am Chem Soc; 2010 Jul; 132(29):10148-54. PubMed ID: 20597502
[TBL] [Abstract][Full Text] [Related]
8. The long-range P3 helix of the Tetrahymena ribozyme is disrupted during folding between the native and misfolded conformations.
Mitchell D; Jarmoskaite I; Seval N; Seifert S; Russell R
J Mol Biol; 2013 Aug; 425(15):2670-86. PubMed ID: 23702292
[TBL] [Abstract][Full Text] [Related]
9. Molecular crowding overcomes the destabilizing effects of mutations in a bacterial ribozyme.
Lee HT; Kilburn D; Behrouzi R; Briber RM; Woodson SA
Nucleic Acids Res; 2015 Jan; 43(2):1170-6. PubMed ID: 25541198
[TBL] [Abstract][Full Text] [Related]
10. RNA tertiary interactions mediate native collapse of a bacterial group I ribozyme.
Chauhan S; Caliskan G; Briber RM; Perez-Salas U; Rangan P; Thirumalai D; Woodson SA
J Mol Biol; 2005 Nov; 353(5):1199-209. PubMed ID: 16214167
[TBL] [Abstract][Full Text] [Related]
11. Increased ribozyme activity in crowded solutions.
Desai R; Kilburn D; Lee HT; Woodson SA
J Biol Chem; 2014 Jan; 289(5):2972-7. PubMed ID: 24337582
[TBL] [Abstract][Full Text] [Related]
12. Compact intermediates in RNA folding.
Woodson SA
Annu Rev Biophys; 2010; 39():61-77. PubMed ID: 20192764
[TBL] [Abstract][Full Text] [Related]
13. The Azoarcus group I intron ribozyme misfolds and is accelerated for refolding by ATP-dependent RNA chaperone proteins.
Sinan S; Yuan X; Russell R
J Biol Chem; 2011 Oct; 286(43):37304-12. PubMed ID: 21878649
[TBL] [Abstract][Full Text] [Related]
14. An alternative route for the folding of large RNAs: apparent two-state folding by a group II intron ribozyme.
Su LJ; Brenowitz M; Pyle AM
J Mol Biol; 2003 Dec; 334(4):639-52. PubMed ID: 14636593
[TBL] [Abstract][Full Text] [Related]
15. A chemical phylogeny of group I introns based upon interference mapping of a bacterial ribozyme.
Strauss-Soukup JK; Strobel SA
J Mol Biol; 2000 Sep; 302(2):339-58. PubMed ID: 10970738
[TBL] [Abstract][Full Text] [Related]
16. Stepwise conversion of a mesophilic to a thermophilic ribozyme.
Fang XW; Srividya N; Golden BL; Sosnick TR; Pan T
J Mol Biol; 2003 Jul; 330(2):177-83. PubMed ID: 12823959
[TBL] [Abstract][Full Text] [Related]
17. Fast folding of a ribozyme by stabilizing core interactions: evidence for multiple folding pathways in RNA.
Pan J; Deras ML; Woodson SA
J Mol Biol; 2000 Feb; 296(1):133-44. PubMed ID: 10656822
[TBL] [Abstract][Full Text] [Related]
18. Understanding the role of three-dimensional topology in determining the folding intermediates of group I introns.
Chen C; Mitra S; Jonikas M; Martin J; Brenowitz M; Laederach A
Biophys J; 2013 Mar; 104(6):1326-37. PubMed ID: 23528092
[TBL] [Abstract][Full Text] [Related]
19. A kinetic and thermodynamic framework for the Azoarcus group I ribozyme reaction.
Gleitsman KR; Herschlag DH
RNA; 2014 Nov; 20(11):1732-46. PubMed ID: 25246656
[TBL] [Abstract][Full Text] [Related]
20. The thermodynamic origin of the stability of a thermophilic ribozyme.
Fang XW; Golden BL; Littrell K; Shelton V; Thiyagarajan P; Pan T; Sosnick TR
Proc Natl Acad Sci U S A; 2001 Apr; 98(8):4355-60. PubMed ID: 11296284
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]