These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

104 related articles for article (PubMed ID: 22524526)

  • 21. Free energy surfaces of beta-hairpin and alpha-helical peptides generated by replica exchange molecular dynamics with the AGBNP implicit solvent model.
    Felts AK; Harano Y; Gallicchio E; Levy RM
    Proteins; 2004 Aug; 56(2):310-21. PubMed ID: 15211514
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Synthesis and conformational analysis of N-glycopeptides. II. CD, molecular dynamics, and NMR spectroscopic studies on linear N-glycopeptides.
    Perczel A; Kollát E; Hollósi M; Fasman GD
    Biopolymers; 1993 Apr; 33(4):665-85. PubMed ID: 8467070
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Effects of glycosylation on peptide conformation: a synergistic experimental and computational study.
    Bosques CJ; Tschampel SM; Woods RJ; Imperiali B
    J Am Chem Soc; 2004 Jul; 126(27):8421-5. PubMed ID: 15237998
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Folding simulations of Trp-cage mini protein in explicit solvent using biasing potential replica-exchange molecular dynamics simulations.
    Kannan S; Zacharias M
    Proteins; 2009 Aug; 76(2):448-60. PubMed ID: 19173315
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Glycopeptide probes for understanding peptide specificity of the folding sensor enzyme UGGT.
    Kudo T; Hirano M; Ishihara T; Shimura S; Totani K
    Bioorg Med Chem Lett; 2014 Dec; 24(24):5563-5567. PubMed ID: 25466175
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Influence of solvent and intramolecular hydrogen bonding on the conformational properties of o-linked glycopeptides.
    Mallajosyula SS; MacKerell AD
    J Phys Chem B; 2011 Sep; 115(38):11215-29. PubMed ID: 21823626
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Conformational studies by NMR of the antimicrobial peptide, drosocin, and its non-glycosylated derivative: effects of glycosylation on solution conformation.
    McManus AM; Otvos L; Hoffmann R; Craik DJ
    Biochemistry; 1999 Jan; 38(2):705-14. PubMed ID: 9888811
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Disaccharide binding to galectin-1: free energy calculations and molecular recognition mechanism.
    Echeverria I; Amzel LM
    Biophys J; 2011 May; 100(9):2283-92. PubMed ID: 21539798
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Conformational properties of acidic oligo- and disaccharides and their ability to bind calcium: a molecular modeling study.
    Plazinski W
    Carbohydr Res; 2012 Aug; 357():111-7. PubMed ID: 22704197
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Transformation of a design peptide between the α-helix and β-hairpin structures using a helix-strand replica-exchange molecular dynamics simulation.
    Okumura H; Itoh SG
    Phys Chem Chem Phys; 2013 Sep; 15(33):13852-61. PubMed ID: 23839056
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Absence of reptation in the high-temperature folding of the trpzip2 beta-hairpin peptide.
    Pitera JW; Haque I; Swope WC
    J Chem Phys; 2006 Apr; 124(14):141102. PubMed ID: 16626172
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Reproducible polypeptide folding and structure prediction using molecular dynamics simulations.
    Seibert MM; Patriksson A; Hess B; van der Spoel D
    J Mol Biol; 2005 Nov; 354(1):173-83. PubMed ID: 16236315
    [TBL] [Abstract][Full Text] [Related]  

  • 33. How well does Poisson-Boltzmann implicit solvent agree with explicit solvent? A quantitative analysis.
    Tan C; Yang L; Luo R
    J Phys Chem B; 2006 Sep; 110(37):18680-7. PubMed ID: 16970499
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Revealing hidden helix propensity in Aβ peptides by molecular dynamics simulations.
    Lockhart C; Klimov DK
    J Phys Chem B; 2013 Oct; 117(40):12030-8. PubMed ID: 24016319
    [TBL] [Abstract][Full Text] [Related]  

  • 35. How hydrophobicity and the glycosylation site of glycans affect protein folding and stability: a molecular dynamics simulation.
    Lu D; Yang C; Liu Z
    J Phys Chem B; 2012 Jan; 116(1):390-400. PubMed ID: 22118044
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Solvent interactions stabilize the polyproline II conformation of glycosylated oligoprolines.
    Naziga EB; Schweizer F; Wetmore SD
    J Phys Chem B; 2013 Mar; 117(9):2671-81. PubMed ID: 23363073
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Effects of pH and temperature on the structural and thermodynamic character of alpha-syn12 peptide in aqueous solution.
    Cao Z; Liu L; Wang J
    J Biomol Struct Dyn; 2010 Dec; 28(3):343-53. PubMed ID: 20919750
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Impact of glycosylation on stability, structure and unfolding of soybean agglutinin (SBA): an insight from thermal perturbation molecular dynamics simulations.
    Halder S; Surolia A; Mukhopadhyay C
    Glycoconj J; 2015 Aug; 32(6):371-84. PubMed ID: 26077366
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Convergence and sampling efficiency in replica exchange simulations of peptide folding in explicit solvent.
    Periole X; Mark AE
    J Chem Phys; 2007 Jan; 126(1):014903. PubMed ID: 17212515
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Molecular dynamics simulations and free energy analyses on the dimer formation of an amyloidogenic heptapeptide from human beta2-microglobulin: implication for the protofibril structure.
    Lei H; Wu C; Wang Z; Duan Y
    J Mol Biol; 2006 Mar; 356(4):1049-63. PubMed ID: 16403526
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.