BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

161 related articles for article (PubMed ID: 22536962)

  • 1. Intuitive representation of surface properties of biomolecules using BioBlender.
    Andrei RM; Callieri M; Zini MF; Loni T; Maraziti G; Pan MC; Zoppè M
    BMC Bioinformatics; 2012 Mar; 13 Suppl 4(Suppl 4):S16. PubMed ID: 22536962
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MolSurfer: A macromolecular interface navigator.
    Gabdoulline RR; Wade RC; Walther D
    Nucleic Acids Res; 2003 Jul; 31(13):3349-51. PubMed ID: 12824324
    [TBL] [Abstract][Full Text] [Related]  

  • 3. BALLView: an object-oriented molecular visualization and modeling framework.
    Moll A; Hildebrandt A; Lenhof HP; Kohlbacher O
    J Comput Aided Mol Des; 2005 Nov; 19(11):791-800. PubMed ID: 16470421
    [TBL] [Abstract][Full Text] [Related]  

  • 4. VASCo: computation and visualization of annotated protein surface contacts.
    Steinkellner G; Rader R; Thallinger GG; Kratky C; Gruber K
    BMC Bioinformatics; 2009 Jan; 10():32. PubMed ID: 19166624
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Precise control of surface electrostatic forces on polymer brush layers with opposite charges for resistance to protein adsorption.
    Sakata S; Inoue Y; Ishihara K
    Biomaterials; 2016 Oct; 105():102-108. PubMed ID: 27512944
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CMView: interactive contact map visualization and analysis.
    Vehlow C; Stehr H; Winkelmann M; Duarte JM; Petzold L; Dinse J; Lappe M
    Bioinformatics; 2011 Jun; 27(11):1573-4. PubMed ID: 21471016
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Protein electrostatics: a review of the equations and methods used to model electrostatic equations in biomolecules--applications in biotechnology.
    Neves-Petersen MT; Petersen SB
    Biotechnol Annu Rev; 2003; 9():315-95. PubMed ID: 14650935
    [TBL] [Abstract][Full Text] [Related]  

  • 8. PBEQ-Solver for online visualization of electrostatic potential of biomolecules.
    Jo S; Vargyas M; Vasko-Szedlar J; Roux B; Im W
    Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W270-5. PubMed ID: 18508808
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Game on, science - how video game technology may help biologists tackle visualization challenges.
    Lv Z; Tek A; Da Silva F; Empereur-mot C; Chavent M; Baaden M
    PLoS One; 2013; 8(3):e57990. PubMed ID: 23483961
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Differential geometry based solvation model II: Lagrangian formulation.
    Chen Z; Baker NA; Wei GW
    J Math Biol; 2011 Dec; 63(6):1139-200. PubMed ID: 21279359
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PolyFold: An interactive visual simulator for distance-based protein folding.
    McGehee AJ; Bhattacharya S; Roche R; Bhattacharya D
    PLoS One; 2020; 15(12):e0243331. PubMed ID: 33270805
    [TBL] [Abstract][Full Text] [Related]  

  • 12. RNAmap2D - calculation, visualization and analysis of contact and distance maps for RNA and protein-RNA complex structures.
    Pietal MJ; Szostak N; Rother KM; Bujnicki JM
    BMC Bioinformatics; 2012 Dec; 13():333. PubMed ID: 23259794
    [TBL] [Abstract][Full Text] [Related]  

  • 13. fMRI data visualization with BrainBlend and Blender.
    Pyka M; Hertog M; Fernandez R; Hauke S; Heider D; Dannlowski U; Konrad C
    Neuroinformatics; 2010 Mar; 8(1):21-31. PubMed ID: 20033355
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PCE: web tools to compute protein continuum electrostatics.
    Miteva MA; Tufféry P; Villoutreix BO
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W372-5. PubMed ID: 15980492
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PLATINUM: a web tool for analysis of hydrophobic/hydrophilic organization of biomolecular complexes.
    Pyrkov TV; Chugunov AO; Krylov NA; Nolde DE; Efremov RG
    Bioinformatics; 2009 May; 25(9):1201-2. PubMed ID: 19244385
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Isolating influential regions of electrostatic focusing in protein and DNA structure.
    Blumenthal S; Tang Y; Yang W; Chen BY
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(5):1188-98. PubMed ID: 24384707
    [TBL] [Abstract][Full Text] [Related]  

  • 17. 3D-SURFER: software for high-throughput protein surface comparison and analysis.
    La D; Esquivel-Rodríguez J; Venkatraman V; Li B; Sael L; Ueng S; Ahrendt S; Kihara D
    Bioinformatics; 2009 Nov; 25(21):2843-4. PubMed ID: 19759195
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Voroprot: an interactive tool for the analysis and visualization of complex geometric features of protein structure.
    Olechnovic K; Margelevicius M; Venclovas C
    Bioinformatics; 2011 Mar; 27(5):723-4. PubMed ID: 21186248
    [TBL] [Abstract][Full Text] [Related]  

  • 19. GridMol: a grid application for molecular modeling and visualization.
    Sun Y; Shen B; Lu Z; Jin Z; Chi X
    J Comput Aided Mol Des; 2008 Feb; 22(2):119-29. PubMed ID: 18231861
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Electrostatic potential calculation for biomolecules--creating a database of pre-calculated values reported on a per residue basis for all PDB protein structures.
    Rocchia W; Neshich G
    Genet Mol Res; 2007 Oct; 6(4):923-36. PubMed ID: 18058713
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.