89 related articles for article (PubMed ID: 22539397)
1. An integrative segmentation method for detecting germline copy number variations in SNP arrays.
Shi J; Li P
Genet Epidemiol; 2012 May; 36(4):373-83. PubMed ID: 22539397
[TBL] [Abstract][Full Text] [Related]
2. Family-Based Benchmarking of Copy Number Variation Detection Software.
Nutsua ME; Fischer A; Nebel A; Hofmann S; Schreiber S; Krawczak M; Nothnagel M
PLoS One; 2015; 10(7):e0133465. PubMed ID: 26197066
[TBL] [Abstract][Full Text] [Related]
3. Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform.
Eckel-Passow JE; Atkinson EJ; Maharjan S; Kardia SL; de Andrade M
BMC Bioinformatics; 2011 May; 12():220. PubMed ID: 21627824
[TBL] [Abstract][Full Text] [Related]
4. Genome-wide algorithm for detecting CNV associations with diseases.
Xu Y; Peng B; Fu Y; Amos CI
BMC Bioinformatics; 2011 Aug; 12():331. PubMed ID: 21827692
[TBL] [Abstract][Full Text] [Related]
5. Characterization of copy number variants in a large multibreed population of beef and dairy cattle using high-density single nucleotide polymorphism genotype data.
Rafter P; Purfield DC; Berry DP; Parnell AC; Gormley IC; Kearney JF; Coffey MP; Carthy TR
J Anim Sci; 2018 Sep; 96(10):4112-4124. PubMed ID: 30239746
[TBL] [Abstract][Full Text] [Related]
6. PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data.
Wang K; Li M; Hadley D; Liu R; Glessner J; Grant SF; Hakonarson H; Bucan M
Genome Res; 2007 Nov; 17(11):1665-74. PubMed ID: 17921354
[TBL] [Abstract][Full Text] [Related]
7. HaplotypeCN: copy number haplotype inference with Hidden Markov Model and localized haplotype clustering.
Lin YJ; Chen YT; Hsu SN; Peng CH; Tang CY; Yen TC; Hsieh WP
PLoS One; 2014; 9(5):e96841. PubMed ID: 24849202
[TBL] [Abstract][Full Text] [Related]
8. Distinguishing somatic and germline copy number events in cancer patient DNA hybridized to whole-genome SNP genotyping arrays.
Ha G; Shah S
Methods Mol Biol; 2013; 973():355-72. PubMed ID: 23412801
[TBL] [Abstract][Full Text] [Related]
9. Identification of Copy Number Variants from SNP Arrays Using PennCNV.
Fang L; Wang K
Methods Mol Biol; 2018; 1833():1-28. PubMed ID: 30039360
[TBL] [Abstract][Full Text] [Related]
10. Fast detection of de novo copy number variants from SNP arrays for case-parent trios.
Scharpf RB; Beaty TH; Schwender H; Younkin SG; Scott AF; Ruczinski I
BMC Bioinformatics; 2012 Dec; 13():330. PubMed ID: 23234608
[TBL] [Abstract][Full Text] [Related]
11. Quantifying copy number variations using a hidden Markov model with inhomogeneous emission distributions.
McCallum KJ; Wang JP
Biostatistics; 2013 Jul; 14(3):600-11. PubMed ID: 23428932
[TBL] [Abstract][Full Text] [Related]
12. PennCNV in whole-genome sequencing data.
de Araújo Lima L; Wang K
BMC Bioinformatics; 2017 Oct; 18(Suppl 11):383. PubMed ID: 28984186
[TBL] [Abstract][Full Text] [Related]
13. Modeling genetic inheritance of copy number variations.
Wang K; Chen Z; Tadesse MG; Glessner J; Grant SF; Hakonarson H; Bucan M; Li M
Nucleic Acids Res; 2008 Dec; 36(21):e138. PubMed ID: 18832372
[TBL] [Abstract][Full Text] [Related]
14. Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays.
Komura D; Shen F; Ishikawa S; Fitch KR; Chen W; Zhang J; Liu G; Ihara S; Nakamura H; Hurles ME; Lee C; Scherer SW; Jones KW; Shapero MH; Huang J; Aburatani H
Genome Res; 2006 Dec; 16(12):1575-84. PubMed ID: 17122084
[TBL] [Abstract][Full Text] [Related]
15. Cheek swabs, SNP chips, and CNVs: assessing the quality of copy number variant calls generated with subject-collected mail-in buccal brush DNA samples on a high-density genotyping microarray.
Erickson SW; MacLeod SL; Hobbs CA
BMC Med Genet; 2012 Jun; 13():51. PubMed ID: 22734463
[TBL] [Abstract][Full Text] [Related]
16. Genome-wide copy number analysis using copy number inferring tool (CNIT) and DNA pooling.
Lin CH; Huang MC; Li LH; Wu JY; Chen YT; Fann CS
Hum Mutat; 2008 Aug; 29(8):1055-62. PubMed ID: 18470944
[TBL] [Abstract][Full Text] [Related]
17. QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data.
Colella S; Yau C; Taylor JM; Mirza G; Butler H; Clouston P; Bassett AS; Seller A; Holmes CC; Ragoussis J
Nucleic Acids Res; 2007; 35(6):2013-25. PubMed ID: 17341461
[TBL] [Abstract][Full Text] [Related]
18. A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays.
Lamy P; Andersen CL; Dyrskjot L; Torring N; Wiuf C
BMC Bioinformatics; 2007 Nov; 8():434. PubMed ID: 17996079
[TBL] [Abstract][Full Text] [Related]
19. Hardy-Weinberg equilibrium revisited for inferences on genotypes featuring allele and copy-number variations.
Recke A; Recke KG; Ibrahim S; Möller S; Vonthein R
Sci Rep; 2015 Mar; 5():9066. PubMed ID: 25765626
[TBL] [Abstract][Full Text] [Related]
20. Recurrent Rare Copy Number Variants Increase Risk for Esotropia.
Whitman MC; Di Gioia SA; Chan WM; Gelber A; Pratt BM; Bell JL; Collins TE; Knowles JA; Armoskus C; Pato M; Pato C; Shaaban S; Staffieri S; MacKinnon S; Maconachie GDE; Elder JE; Traboulsi EI; Gottlob I; Mackey DA; Hunter DG; Engle EC;
Invest Ophthalmol Vis Sci; 2020 Aug; 61(10):22. PubMed ID: 32780866
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
