BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

73 related articles for article (PubMed ID: 22545997)

  • 1. Structural dynamics of full-length retroviral integrase: a molecular dynamics analysis.
    Balasubramanian S; Rajagopalan M; Ramaswamy A
    J Biomol Struct Dyn; 2012; 29(6):659-70. PubMed ID: 22545997
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular dynamics studies of the full-length integrase-DNA complex.
    De Luca L; Vistoli G; Pedretti A; Barreca ML; Chimirri A
    Biochem Biophys Res Commun; 2005 Nov; 336(4):1010-6. PubMed ID: 16165087
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The conformational feasibility for the formation of reaching dimer in ASV and HIV integrase: a molecular dynamics study.
    Balasubramanian S; Rajagopalan M; Bojja RS; Skalka AM; Andrake MD; Ramaswamy A
    J Biomol Struct Dyn; 2017 Dec; 35(16):3469-3485. PubMed ID: 27835934
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Computational studies of the interaction between the HIV-1 integrase tetramer and the cofactor LEDGF/p75: insights from molecular dynamics simulations and the informational spectrum method.
    Tintori C; Veljkovic N; Veljkovic V; Botta M
    Proteins; 2010 Dec; 78(16):3396-408. PubMed ID: 20878714
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Structural and dynamical properties of a full-length HIV-1 integrase: molecular dynamics simulations.
    Wijitkosoom A; Tonmunphean S; Truong TN; Hannongbua S
    J Biomol Struct Dyn; 2006 Jun; 23(6):613-24. PubMed ID: 16615807
    [TBL] [Abstract][Full Text] [Related]  

  • 6. X-ray structure of simian immunodeficiency virus integrase containing the core and C-terminal domain (residues 50-293)--an initial glance of the viral DNA binding platform.
    Chen Z; Yan Y; Munshi S; Li Y; Zugay-Murphy J; Xu B; Witmer M; Felock P; Wolfe A; Sardana V; Emini EA; Hazuda D; Kuo LC
    J Mol Biol; 2000 Feb; 296(2):521-33. PubMed ID: 10669606
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Molecular dynamics simulations of the HIV-1 integrase dimerization interface: guidelines for the design of a novel class of integrase inhibitors.
    Sippel M; Sotriffer CA
    J Chem Inf Model; 2010 Apr; 50(4):604-14. PubMed ID: 20230013
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structural dynamics of native and V260E mutant C-terminal domain of HIV-1 integrase.
    Sangeetha B; Muthukumaran R; Amutha R
    J Comput Aided Mol Des; 2015 Apr; 29(4):371-85. PubMed ID: 25586721
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Crystal structure of an active two-domain derivative of Rous sarcoma virus integrase.
    Yang ZN; Mueser TC; Bushman FD; Hyde CC
    J Mol Biol; 2000 Feb; 296(2):535-48. PubMed ID: 10669607
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Brownian and essential dynamics studies of the HIV-1 integrase catalytic domain.
    Weber W; Demirdjian H; Lins RD; Briggs JM; Ferreira R; McCammon JA
    J Biomol Struct Dyn; 1998 Dec; 16(3):733-45. PubMed ID: 10052629
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Modeling HIV-1 integrase complexes based on their hydrodynamic properties.
    Podtelezhnikov AA; Gao K; Bushman FD; McCammon JA
    Biopolymers; 2003 Jan; 68(1):110-20. PubMed ID: 12579583
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Mapping features of HIV-1 integrase near selected sites on viral and target DNA molecules in an active enzyme-DNA complex by photo-cross-linking.
    Heuer TS; Brown PO
    Biochemistry; 1997 Sep; 36(35):10655-65. PubMed ID: 9271496
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Docking dinucleotides to HIV-1 integrase carboxyl-terminal domain to find possible DNA binding sites.
    Zhu HM; Chen WZ; Wang CX
    Bioorg Med Chem Lett; 2005 Jan; 15(2):475-7. PubMed ID: 15603976
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Hyrtiosal, from the marine sponge Hyrtios erectus, inhibits HIV-1 integrase binding to viral DNA by a new inhibitor binding site.
    Du L; Shen L; Yu Z; Chen J; Guo Y; Tang Y; Shen X; Jiang H
    ChemMedChem; 2008 Jan; 3(1):173-80. PubMed ID: 17943714
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Communications: Electron polarization critically stabilizes the Mg2+ complex in the catalytic core domain of HIV-1 integrase.
    Lu Y; Mei Y; Zhang JZ; Zhang D
    J Chem Phys; 2010 Apr; 132(13):131101. PubMed ID: 20387913
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Complexes of HIV-1 integrase with HAT proteins: multiscale models, dynamics, and hypotheses on allosteric sites of inhibition.
    Di Fenza A; Rocchia W; Tozzini V
    Proteins; 2009 Sep; 76(4):946-58. PubMed ID: 19306343
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Constructing HIV-1 integrase tetramer and exploring influences of metal ions on forming integrase-DNA complex.
    Wang LD; Liu CL; Chen WZ; Wang CX
    Biochem Biophys Res Commun; 2005 Nov; 337(1):313-9. PubMed ID: 16188234
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Molecular mechanism of HIV-1 integrase-vDNA interactions and strand transfer inhibitor action: a molecular modeling perspective.
    Xue W; Liu H; Yao X
    J Comput Chem; 2012 Feb; 33(5):527-36. PubMed ID: 22144113
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Photo-cross-linking studies suggest a model for the architecture of an active human immunodeficiency virus type 1 integrase-DNA complex.
    Heuer TS; Brown PO
    Biochemistry; 1998 May; 37(19):6667-78. PubMed ID: 9578550
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Characterization and structural analysis of HIV-1 integrase conservation.
    Ceccherini-Silberstein F; Malet I; D'Arrigo R; Antinori A; Marcelin AG; Perno CF
    AIDS Rev; 2009; 11(1):17-29. PubMed ID: 19290031
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 4.