BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

151 related articles for article (PubMed ID: 22592981)

  • 1. Two steps forward--one step back: advances in affinity purification mass spectrometry of macromolecular complexes.
    Oeffinger M
    Proteomics; 2012 May; 12(10):1591-608. PubMed ID: 22592981
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Single-Step Affinity Purification (ssAP) and Mass Spectrometry of Macromolecular Complexes in the Yeast S. cerevisiae.
    Trahan C; Oeffinger M
    Methods Mol Biol; 2022; 2477():195-223. PubMed ID: 35524119
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A Structured Workflow for Mapping Human Sin3 Histone Deacetylase Complex Interactions Using Halo-MudPIT Affinity-Purification Mass Spectrometry.
    Banks CAS; Thornton JL; Eubanks CG; Adams MK; Miah S; Boanca G; Liu X; Katt ML; Parmely TJ; Florens L; Washburn MP
    Mol Cell Proteomics; 2018 Jul; 17(7):1432-1447. PubMed ID: 29599190
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Recent progress in mass spectrometry-based strategies for elucidating protein-protein interactions.
    Low TY; Syafruddin SE; Mohtar MA; Vellaichamy A; A Rahman NS; Pung YF; Tan CSH
    Cell Mol Life Sci; 2021 Jul; 78(13):5325-5339. PubMed ID: 34046695
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SAINT: probabilistic scoring of affinity purification-mass spectrometry data.
    Choi H; Larsen B; Lin ZY; Breitkreutz A; Mellacheruvu D; Fermin D; Qin ZS; Tyers M; Gingras AC; Nesvizhskii AI
    Nat Methods; 2011 Jan; 8(1):70-3. PubMed ID: 21131968
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Analyzing Protein Interactions by MAC-Tag Approaches.
    Liu X; Salokas K; Keskitalo S; Martínez-Botía P; Varjosalo M
    Methods Mol Biol; 2023; 2690():281-297. PubMed ID: 37450155
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The CRAPome: a contaminant repository for affinity purification-mass spectrometry data.
    Mellacheruvu D; Wright Z; Couzens AL; Lambert JP; St-Denis NA; Li T; Miteva YV; Hauri S; Sardiu ME; Low TY; Halim VA; Bagshaw RD; Hubner NC; Al-Hakim A; Bouchard A; Faubert D; Fermin D; Dunham WH; Goudreault M; Lin ZY; Badillo BG; Pawson T; Durocher D; Coulombe B; Aebersold R; Superti-Furga G; Colinge J; Heck AJ; Choi H; Gstaiger M; Mohammed S; Cristea IM; Bennett KL; Washburn MP; Raught B; Ewing RM; Gingras AC; Nesvizhskii AI
    Nat Methods; 2013 Aug; 10(8):730-6. PubMed ID: 23921808
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Protocol for affinity purification-mass spectrometry interactome profiling in larvae of Drosophila melanogaster.
    Guo Y; Hartson SD; Rogers J; Brooks-Kanost L; Brooks D; Geisbrecht ER
    STAR Protoc; 2024 Jun; 5(2):103064. PubMed ID: 38743568
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Affinity purification-mass spectrometry and network analysis to understand protein-protein interactions.
    Morris JH; Knudsen GM; Verschueren E; Johnson JR; Cimermancic P; Greninger AL; Pico AR
    Nat Protoc; 2014 Nov; 9(11):2539-54. PubMed ID: 25275790
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Advances in protein complex analysis using mass spectrometry.
    Gingras AC; Aebersold R; Raught B
    J Physiol; 2005 Feb; 563(Pt 1):11-21. PubMed ID: 15611014
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Affinity Purification-Mass Spectroscopy (AP-MS) and Co-Immunoprecipitation (Co-IP) Technique to Study Protein-Protein Interactions.
    Gnanasekaran P; Pappu HR
    Methods Mol Biol; 2023; 2690():81-85. PubMed ID: 37450138
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Scoring Large-Scale Affinity Purification Mass Spectrometry Datasets with MiST.
    Verschueren E; Von Dollen J; Cimermancic P; Gulbahce N; Sali A; Krogan NJ
    Curr Protoc Bioinformatics; 2015 Mar; 49():8.19.1-8.19.16. PubMed ID: 25754993
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Illuminating the dark protein-protein interactome.
    Sharifi Tabar M; Parsania C; Chen H; Su XD; Bailey CG; Rasko JEJ
    Cell Rep Methods; 2022 Aug; 2(8):100275. PubMed ID: 36046620
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Deep interactome profiling of membrane proteins by co-interacting protein identification technology.
    Pankow S; Bamberger C; Calzolari D; Bamberger A; Yates JR
    Nat Protoc; 2016 Dec; 11(12):2515-2528. PubMed ID: 27854364
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Mass spectrometry-based protein-protein interaction networks for the study of human diseases.
    Richards AL; Eckhardt M; Krogan NJ
    Mol Syst Biol; 2021 Jan; 17(1):e8792. PubMed ID: 33434350
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Deciphering molecular interactions by proximity labeling.
    Qin W; Cho KF; Cavanagh PE; Ting AY
    Nat Methods; 2021 Feb; 18(2):133-143. PubMed ID: 33432242
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Native Mass Spectrometry: Recent Progress and Remaining Challenges.
    Karch KR; Snyder DT; Harvey SR; Wysocki VH
    Annu Rev Biophys; 2022 May; 51():157-179. PubMed ID: 34982572
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A biotin targeting chimera (BioTAC) system to map small molecule interactomes in situ.
    Tao AJ; Jiang J; Gadbois GE; Goyal P; Boyle BT; Mumby EJ; Myers SA; English JG; Ferguson FM
    Nat Commun; 2023 Dec; 14(1):8016. PubMed ID: 38049406
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Mapping Differential Protein-Protein Interaction Networks using Affinity Purification Mass Spectrometry.
    Kaushal P; Ummadi MR; Jang GM; Delgado Y; Makanani SK; Blanc SF; Winters DM; Xu J; Polacco B; Zhou Y; Stevenson E; Eckhardt M; Zuliani-Alvarez L; Kaake R; Swaney DL; Krogan N; Bouhaddou M
    ArXiv; 2024 May; ():. PubMed ID: 38800652
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The World of Stable Ribonucleoproteins and Its Mapping With Grad-Seq and Related Approaches.
    Gerovac M; Vogel J; Smirnov A
    Front Mol Biosci; 2021; 8():661448. PubMed ID: 33898526
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.