322 related articles for article (PubMed ID: 22605342)
1. Distinct functions of regions 1.1 and 1.2 of RNA polymerase σ subunits from Escherichia coli and Thermus aquaticus in transcription initiation.
Miropolskaya N; Ignatov A; Bass I; Zhilina E; Pupov D; Kulbachinskiy A
J Biol Chem; 2012 Jul; 287(28):23779-89. PubMed ID: 22605342
[TBL] [Abstract][Full Text] [Related]
2. Characteristics of σ-dependent pausing by RNA polymerases from Escherichia coli and Thermus aquaticus.
Zhilina EV; Miropolskaya NA; Bass IA; Brodolin KL; Kulbachinskiy AV
Biochemistry (Mosc); 2011 Oct; 76(10):1098-106. PubMed ID: 22098235
[TBL] [Abstract][Full Text] [Related]
3. RNA polymerase-promoter interactions determining different stability of the Escherichia coli and Thermus aquaticus transcription initiation complexes.
Mekler V; Minakhin L; Kuznedelov K; Mukhamedyarov D; Severinov K
Nucleic Acids Res; 2012 Dec; 40(22):11352-62. PubMed ID: 23087380
[TBL] [Abstract][Full Text] [Related]
4. Structural modules of RNA polymerase required for transcription from promoters containing downstream basal promoter element GGGA.
Barinova N; Kuznedelov K; Severinov K; Kulbachinskiy A
J Biol Chem; 2008 Aug; 283(33):22482-9. PubMed ID: 18574242
[TBL] [Abstract][Full Text] [Related]
5. Lineage-specific amino acid substitutions in region 2 of the RNA polymerase sigma subunit affect the temperature of promoter opening.
Barinova N; Zhilina E; Bass I; Nikiforov V; Kulbachinskiy A
J Bacteriol; 2008 Apr; 190(8):3088-92. PubMed ID: 18281402
[TBL] [Abstract][Full Text] [Related]
6. Recombinant Thermus aquaticus RNA polymerase, a new tool for structure-based analysis of transcription.
Minakhin L; Nechaev S; Campbell EA; Severinov K
J Bacteriol; 2001 Jan; 183(1):71-6. PubMed ID: 11114902
[TBL] [Abstract][Full Text] [Related]
7. Mutations in RNA Polymerase Bridge Helix and Switch Regions Affect Active-Site Networks and Transcript-Assisted Hydrolysis.
Zhang N; Schäfer J; Sharma A; Rayner L; Zhang X; Tuma R; Stockley P; Buck M
J Mol Biol; 2015 Nov; 427(22):3516-3526. PubMed ID: 26365052
[TBL] [Abstract][Full Text] [Related]
8. Changes in conserved region 3 of Escherichia coli sigma 70 reduce abortive transcription and enhance promoter escape.
Cashel M; Hsu LM; Hernandez VJ
J Biol Chem; 2003 Feb; 278(8):5539-47. PubMed ID: 12477716
[TBL] [Abstract][Full Text] [Related]
9. Differences in contacts of RNA polymerases from Escherichia coli and Thermus aquaticus with lacUV5 promoter are determined by core-enzyme of RNA polymerase.
Kulbachinskiy AV; Nikiforov VG; Brodolin KL
Biochemistry (Mosc); 2005 Nov; 70(11):1227-30. PubMed ID: 16336181
[TBL] [Abstract][Full Text] [Related]
10. Role of the RNA polymerase sigma subunit in transcription initiation.
Borukhov S; Severinov K
Res Microbiol; 2002 Nov; 153(9):557-62. PubMed ID: 12455702
[TBL] [Abstract][Full Text] [Related]
11. Aromatic amino acids in region 2.3 of Escherichia coli sigma 70 participate collectively in the formation of an RNA polymerase-promoter open complex.
Panaghie G; Aiyar SE; Bobb KL; Hayward RS; de Haseth PL
J Mol Biol; 2000 Jun; 299(5):1217-30. PubMed ID: 10873447
[TBL] [Abstract][Full Text] [Related]
12. Role of Interactions of the CRE Region of Escherichia coli RNA Polymerase with Nontemplate DNA during Promoter Escape.
Petushkov IV; Kulbachinskiy AV
Biochemistry (Mosc); 2020 Jul; 85(7):792-800. PubMed ID: 33040723
[TBL] [Abstract][Full Text] [Related]
13. Isolation and characterization of mutations in region 1.2 of Escherichia coli sigma70.
Baldwin NE; Dombroski AJ
Mol Microbiol; 2001 Oct; 42(2):427-37. PubMed ID: 11703665
[TBL] [Abstract][Full Text] [Related]
14. Cryo-EM structure of
Narayanan A; Vago FS; Li K; Qayyum MZ; Yernool D; Jiang W; Murakami KS
J Biol Chem; 2018 May; 293(19):7367-7375. PubMed ID: 29581236
[TBL] [Abstract][Full Text] [Related]
15. Universal functions of the σ finger in alternative σ factors during transcription initiation by bacterial RNA polymerase.
Oguienko A; Petushkov I; Pupov D; Esyunina D; Kulbachinskiy A
RNA Biol; 2021 Nov; 18(11):2028-2037. PubMed ID: 33573428
[TBL] [Abstract][Full Text] [Related]
16. Beta subunit residues 186-433 and 436-445 are commonly used by Esigma54 and Esigma70 RNA polymerase for open promoter complex formation.
Wigneshweraraj SR; Nechaev S; Severinov K; Buck M
J Mol Biol; 2002 Jun; 319(5):1067-83. PubMed ID: 12079348
[TBL] [Abstract][Full Text] [Related]
17. Multiple roles of the RNA polymerase beta subunit flap domain in sigma 54-dependent transcription.
Wigneshweraraj SR; Kuznedelov K; Severinov K; Buck M
J Biol Chem; 2003 Jan; 278(5):3455-65. PubMed ID: 12424241
[TBL] [Abstract][Full Text] [Related]
18. Protein-protein interactions between sigma(70) region 4 of RNA polymerase and Escherichia coli SoxS, a transcription activator that functions by the prerecruitment mechanism: evidence for "off-DNA" and "on-DNA" interactions.
Zafar MA; Shah IM; Wolf RE
J Mol Biol; 2010 Aug; 401(1):13-32. PubMed ID: 20595001
[TBL] [Abstract][Full Text] [Related]
19. Specific recognition of the -10 promoter element by the free RNA polymerase sigma subunit.
Sevostyanova A; Feklistov A; Barinova N; Heyduk E; Bass I; Klimasauskas S; Heyduk T; Kulbachinskiy A
J Biol Chem; 2007 Jul; 282(30):22033-9. PubMed ID: 17535803
[TBL] [Abstract][Full Text] [Related]
20. Region 3.2 of the sigma subunit contributes to the binding of the 3'-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiation.
Kulbachinskiy A; Mustaev A
J Biol Chem; 2006 Jul; 281(27):18273-6. PubMed ID: 16690607
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
