These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

150 related articles for article (PubMed ID: 22642116)

  • 41. SDM: a fast distance-based approach for (super) tree building in phylogenomics.
    Criscuolo A; Berry V; Douzery EJ; Gascuel O
    Syst Biol; 2006 Oct; 55(5):740-55. PubMed ID: 17060196
    [TBL] [Abstract][Full Text] [Related]  

  • 42. A multi-neighbor-joining approach for phylogenetic tree reconstruction and visualization.
    Silva AE; Villanueva WJ; Knidel H; Bonato VC; Reis SF; Von Zuben FJ
    Genet Mol Res; 2005 Sep; 4(3):525-34. PubMed ID: 16342037
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Supertree algorithms for ancestral divergence dates and nested taxa.
    Semple C; Daniel P; Hordijk W; Page RD; Steel M
    Bioinformatics; 2004 Oct; 20(15):2355-60. PubMed ID: 15073021
    [TBL] [Abstract][Full Text] [Related]  

  • 44. The shape of supertrees to come: tree shape related properties of fourteen supertree methods.
    Wilkinson M; Cotton JA; Creevey C; Eulenstein O; Harris SR; Lapointe FJ; Levasseur C; McInerney JO; Pisani D; Thorley JL
    Syst Biol; 2005 Jun; 54(3):419-31. PubMed ID: 16012108
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Maximum likelihood supertrees.
    Steel M; Rodrigo A
    Syst Biol; 2008 Apr; 57(2):243-50. PubMed ID: 18398769
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Dealing with incongruence in phylogenomic analyses.
    Galtier N; Daubin V
    Philos Trans R Soc Lond B Biol Sci; 2008 Dec; 363(1512):4023-9. PubMed ID: 18852109
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Fixed-parameter tractability of the maximum agreement supertree problem.
    Guillemot S; Berry V
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(2):342-53. PubMed ID: 20431153
    [TBL] [Abstract][Full Text] [Related]  

  • 48. TurboTree: a fast algorithm for minimal trees.
    Penny D; Hendy MD
    Comput Appl Biosci; 1987 Sep; 3(3):183-7. PubMed ID: 3453227
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Inferring horizontal transfers in the presence of rearrangements by the minimum evolution criterion.
    Birin H; Gal-Or Z; Elias I; Tuller T
    Bioinformatics; 2008 Mar; 24(6):826-32. PubMed ID: 18203769
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Determining species tree topologies from clade probabilities under the coalescent.
    Allman ES; Degnan JH; Rhodes JA
    J Theor Biol; 2011 Nov; 289():96-106. PubMed ID: 21867714
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Comparing two Bayesian methods for gene tree/species tree reconstruction: simulations with incomplete lineage sorting and horizontal gene transfer.
    Chung Y; Ané C
    Syst Biol; 2011 May; 60(3):261-75. PubMed ID: 21368324
    [TBL] [Abstract][Full Text] [Related]  

  • 52. RBT--a tool for building refined Buneman trees.
    Besenbacher S; Mailund T; Westh-Nielsen L; Pedersen CN
    Bioinformatics; 2005 Apr; 21(8):1711-2. PubMed ID: 15585529
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Axiomatic opportunities and obstacles for inferring a species tree from gene trees.
    Steel M; Velasco JD
    Syst Biol; 2014 Sep; 63(5):772-8. PubMed ID: 24951558
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Inferring phylogenetic networks by the maximum parsimony criterion: a case study.
    Jin G; Nakhleh L; Snir S; Tuller T
    Mol Biol Evol; 2007 Jan; 24(1):324-37. PubMed ID: 17068107
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Resolution and reconciliation of non-binary gene trees with transfers, duplications and losses.
    Jacox E; Weller M; Tannier E; Scornavacca C
    Bioinformatics; 2017 Apr; 33(7):980-987. PubMed ID: 28073758
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Quantifying hybridization in realistic time.
    Collins J; Linz S; Semple C
    J Comput Biol; 2011 Oct; 18(10):1305-18. PubMed ID: 21210735
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Collecting reliable clades using the Greedy Strict Consensus Merger.
    Fleischauer M; Böcker S
    PeerJ; 2016; 4():e2172. PubMed ID: 27375971
    [TBL] [Abstract][Full Text] [Related]  

  • 58. PSA: an effective method for predicting horizontal gene transfers through parsimonious phylogenetic networks.
    Zhang Y; Wang J; Yu J
    Cladistics; 2024 Aug; 40(4):443-455. PubMed ID: 38717786
    [TBL] [Abstract][Full Text] [Related]  

  • 59. COSPEDTree: COuplet Supertree by Equivalence Partitioning of Taxa Set and DAG Formation.
    Bhattacharyya S; Mukherjee J
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(3):590-603. PubMed ID: 26357270
    [TBL] [Abstract][Full Text] [Related]  

  • 60. The Performance of Two Supertree Schemes Compared Using Synthetic and Real Data Quartet Input.
    Avni E; Yona Z; Cohen R; Snir S
    J Mol Evol; 2018 Feb; 86(2):150-165. PubMed ID: 29460038
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.