203 related articles for article (PubMed ID: 22650255)
1. Protein-protein docking and hot-spot prediction for drug discovery.
Grosdidier S; Fernández-Recio J
Curr Pharm Des; 2012; 18(30):4607-18. PubMed ID: 22650255
[TBL] [Abstract][Full Text] [Related]
2. Identification of hot-spot residues in protein-protein interactions by computational docking.
Grosdidier S; Fernández-Recio J
BMC Bioinformatics; 2008 Oct; 9():447. PubMed ID: 18939967
[TBL] [Abstract][Full Text] [Related]
3. Structural Prediction of Protein-Protein Interactions by Docking: Application to Biomedical Problems.
Barradas-Bautista D; Rosell M; Pallara C; Fernández-Recio J
Adv Protein Chem Struct Biol; 2018; 110():203-249. PubMed ID: 29412997
[TBL] [Abstract][Full Text] [Related]
4. Hot-spot analysis for drug discovery targeting protein-protein interactions.
Rosell M; Fernández-Recio J
Expert Opin Drug Discov; 2018 Apr; 13(4):327-338. PubMed ID: 29376444
[TBL] [Abstract][Full Text] [Related]
5. Machine Learning Approaches for Protein⁻Protein Interaction Hot Spot Prediction: Progress and Comparative Assessment.
Liu S; Liu C; Deng L
Molecules; 2018 Oct; 23(10):. PubMed ID: 30287797
[TBL] [Abstract][Full Text] [Related]
6. Network analysis and in silico prediction of protein-protein interactions with applications in drug discovery.
Murakami Y; Tripathi LP; Prathipati P; Mizuguchi K
Curr Opin Struct Biol; 2017 Jun; 44():134-142. PubMed ID: 28364585
[TBL] [Abstract][Full Text] [Related]
7. Computational prediction of protein hot spot residues.
Morrow JK; Zhang S
Curr Pharm Des; 2012; 18(9):1255-65. PubMed ID: 22316154
[TBL] [Abstract][Full Text] [Related]
8. Blind predictions of protein interfaces by docking calculations in CAPRI.
Lensink MF; Wodak SJ
Proteins; 2010 Nov; 78(15):3085-95. PubMed ID: 20839234
[TBL] [Abstract][Full Text] [Related]
9. Docking and scoring protein interactions: CAPRI 2009.
Lensink MF; Wodak SJ
Proteins; 2010 Nov; 78(15):3073-84. PubMed ID: 20806235
[TBL] [Abstract][Full Text] [Related]
10. Improving CAPRI predictions: optimized desolvation for rigid-body docking.
Fernández-Recio J; Abagyan R; Totrov M
Proteins; 2005 Aug; 60(2):308-13. PubMed ID: 15981266
[TBL] [Abstract][Full Text] [Related]
11. Modeling Binding Affinity of Pathological Mutations for Computational Protein Design.
Romero-Durana M; Pallara C; Glaser F; Fernández-Recio J
Methods Mol Biol; 2017; 1529():139-159. PubMed ID: 27914049
[TBL] [Abstract][Full Text] [Related]
12. Protein-protein docking with binding site patch prediction and network-based terms enhanced combinatorial scoring.
Gong X; Wang P; Yang F; Chang S; Liu B; He H; Cao L; Xu X; Li C; Chen W; Wang C
Proteins; 2010 Nov; 78(15):3150-5. PubMed ID: 20806233
[TBL] [Abstract][Full Text] [Related]
13. Introducing a Clustering Step in a Consensus Approach for the Scoring of Protein-Protein Docking Models.
Chermak E; De Donato R; Lensink MF; Petta A; Serra L; Scarano V; Cavallo L; Oliva R
PLoS One; 2016; 11(11):e0166460. PubMed ID: 27846259
[TBL] [Abstract][Full Text] [Related]
14. Computational drug design targeting protein-protein interactions.
Bienstock RJ
Curr Pharm Des; 2012; 18(9):1240-54. PubMed ID: 22316151
[TBL] [Abstract][Full Text] [Related]
15. Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI.
Carter P; Lesk VI; Islam SA; Sternberg MJ
Proteins; 2005 Aug; 60(2):281-8. PubMed ID: 15981271
[TBL] [Abstract][Full Text] [Related]
16. Protein interactions in 3D: from interface evolution to drug discovery.
Winter C; Henschel A; Tuukkanen A; Schroeder M
J Struct Biol; 2012 Sep; 179(3):347-58. PubMed ID: 22595401
[TBL] [Abstract][Full Text] [Related]
17. Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures.
Méndez R; Leplae R; Lensink MF; Wodak SJ
Proteins; 2005 Aug; 60(2):150-69. PubMed ID: 15981261
[TBL] [Abstract][Full Text] [Related]
18. Protein-protein interface analysis and hot spots identification for chemical ligand design.
Chen J; Ma X; Yuan Y; Pei J; Lai L
Curr Pharm Des; 2014; 20(8):1192-200. PubMed ID: 23713772
[TBL] [Abstract][Full Text] [Related]
19. Modulating protein-protein interactions: from structural determinants of binding to druggability prediction to application.
Metz A; Ciglia E; Gohlke H
Curr Pharm Des; 2012; 18(30):4630-47. PubMed ID: 22650257
[TBL] [Abstract][Full Text] [Related]
20. Present and future challenges and limitations in protein-protein docking.
Pons C; Grosdidier S; Solernou A; Pérez-Cano L; Fernández-Recio J
Proteins; 2010 Jan; 78(1):95-108. PubMed ID: 19731373
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
