These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

849 related articles for article (PubMed ID: 22689388)

  • 1. synbreed: a framework for the analysis of genomic prediction data using R.
    Wimmer V; Albrecht T; Auinger HJ; Schön CC
    Bioinformatics; 2012 Aug; 28(15):2086-7. PubMed ID: 22689388
    [TBL] [Abstract][Full Text] [Related]  

  • 2. circlize Implements and enhances circular visualization in R.
    Gu Z; Gu L; Eils R; Schlesner M; Brors B
    Bioinformatics; 2014 Oct; 30(19):2811-2. PubMed ID: 24930139
    [TBL] [Abstract][Full Text] [Related]  

  • 3. GHap: an R package for genome-wide haplotyping.
    Utsunomiya YT; Milanesi M; Utsunomiya AT; Ajmone-Marsan P; Garcia JF
    Bioinformatics; 2016 Sep; 32(18):2861-2. PubMed ID: 27283951
    [TBL] [Abstract][Full Text] [Related]  

  • 4. compendiumdb: an R package for retrieval and storage of functional genomics data.
    Nandal UK; van Kampen AH; Moerland PD
    Bioinformatics; 2016 Sep; 32(18):2856-7. PubMed ID: 27323392
    [TBL] [Abstract][Full Text] [Related]  

  • 5. adegenet 1.3-1: new tools for the analysis of genome-wide SNP data.
    Jombart T; Ahmed I
    Bioinformatics; 2011 Nov; 27(21):3070-1. PubMed ID: 21926124
    [TBL] [Abstract][Full Text] [Related]  

  • 6. genipe: an automated genome-wide imputation pipeline with automatic reporting and statistical tools.
    Lemieux Perreault LP; Legault MA; Asselin G; Dubé MP
    Bioinformatics; 2016 Dec; 32(23):3661-3663. PubMed ID: 27497439
    [TBL] [Abstract][Full Text] [Related]  

  • 7. qgg: an R package for large-scale quantitative genetic analyses.
    Rohde PD; Fourie Sørensen I; Sørensen P
    Bioinformatics; 2020 Apr; 36(8):2614-2615. PubMed ID: 31883004
    [TBL] [Abstract][Full Text] [Related]  

  • 8. gsrc: an R package for genome structure rearrangement calling.
    Grandke F; Snowdon R; Samans B
    Bioinformatics; 2017 Feb; 33(4):545-546. PubMed ID: 27797758
    [TBL] [Abstract][Full Text] [Related]  

  • 9. QCGWAS: A flexible R package for automated quality control of genome-wide association results.
    van der Most PJ; Vaez A; Prins BP; Munoz ML; Snieder H; Alizadeh BZ; Nolte IM
    Bioinformatics; 2014 Apr; 30(8):1185-1186. PubMed ID: 24395754
    [TBL] [Abstract][Full Text] [Related]  

  • 10. R.JIVE for exploration of multi-source molecular data.
    O'Connell MJ; Lock EF
    Bioinformatics; 2016 Sep; 32(18):2877-9. PubMed ID: 27273669
    [TBL] [Abstract][Full Text] [Related]  

  • 11. HilbertCurve: an R/Bioconductor package for high-resolution visualization of genomic data.
    Gu Z; Eils R; Schlesner M
    Bioinformatics; 2016 Aug; 32(15):2372-4. PubMed ID: 27153599
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data.
    Wang B; Cunningham JM; Yang XH
    Bioinformatics; 2015 Sep; 31(18):3043-5. PubMed ID: 25979472
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RANKS: a flexible tool for node label ranking and classification in biological networks.
    Valentini G; Armano G; Frasca M; Lin J; Mesiti M; Re M
    Bioinformatics; 2016 Sep; 32(18):2872-4. PubMed ID: 27256314
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Nozzle: a report generation toolkit for data analysis pipelines.
    Gehlenborg N; Noble MS; Getz G; Chin L; Park PJ
    Bioinformatics; 2013 Apr; 29(8):1089-91. PubMed ID: 23419376
    [TBL] [Abstract][Full Text] [Related]  

  • 15. TCGA2STAT: simple TCGA data access for integrated statistical analysis in R.
    Wan YW; Allen GI; Liu Z
    Bioinformatics; 2016 Mar; 32(6):952-4. PubMed ID: 26568634
    [TBL] [Abstract][Full Text] [Related]  

  • 16. IntegratedMRF: random forest-based framework for integrating prediction from different data types.
    Rahman R; Otridge J; Pal R
    Bioinformatics; 2017 May; 33(9):1407-1410. PubMed ID: 28334269
    [TBL] [Abstract][Full Text] [Related]  

  • 17. GAPIT: genome association and prediction integrated tool.
    Lipka AE; Tian F; Wang Q; Peiffer J; Li M; Bradbury PJ; Gore MA; Buckler ES; Zhang Z
    Bioinformatics; 2012 Sep; 28(18):2397-9. PubMed ID: 22796960
    [TBL] [Abstract][Full Text] [Related]  

  • 18. cit: hypothesis testing software for mediation analysis in genomic applications.
    Millstein J; Chen GK; Breton CV
    Bioinformatics; 2016 Aug; 32(15):2364-5. PubMed ID: 27153715
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CollapsABEL: an R library for detecting compound heterozygote alleles in genome-wide association studies.
    Zhong K; Karssen LC; Kayser M; Liu F
    BMC Bioinformatics; 2016 Apr; 17():156. PubMed ID: 27059780
    [TBL] [Abstract][Full Text] [Related]  

  • 20. APCluster: an R package for affinity propagation clustering.
    Bodenhofer U; Kothmeier A; Hochreiter S
    Bioinformatics; 2011 Sep; 27(17):2463-4. PubMed ID: 21737437
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 43.