221 related articles for article (PubMed ID: 22689780)
1. Novel domain combinations in proteins encoded by chimeric transcripts.
Frenkel-Morgenstern M; Valencia A
Bioinformatics; 2012 Jun; 28(12):i67-74. PubMed ID: 22689780
[TBL] [Abstract][Full Text] [Related]
2. Chimeras taking shape: potential functions of proteins encoded by chimeric RNA transcripts.
Frenkel-Morgenstern M; Lacroix V; Ezkurdia I; Levin Y; Gabashvili A; Prilusky J; Del Pozo A; Tress M; Johnson R; Guigo R; Valencia A
Genome Res; 2012 Jul; 22(7):1231-42. PubMed ID: 22588898
[TBL] [Abstract][Full Text] [Related]
3. Identification of Chimeric RNAs Using RNA-Seq Reads and Protein-Protein Interactions of Translated Chimeras.
Frenkel-Morgenstern M
Methods Mol Biol; 2020; 2079():27-40. PubMed ID: 31728960
[TBL] [Abstract][Full Text] [Related]
4. ChiTaRS 5.0: the comprehensive database of chimeric transcripts matched with druggable fusions and 3D chromatin maps.
Balamurali D; Gorohovski A; Detroja R; Palande V; Raviv-Shay D; Frenkel-Morgenstern M
Nucleic Acids Res; 2020 Jan; 48(D1):D825-D834. PubMed ID: 31747015
[TBL] [Abstract][Full Text] [Related]
5. ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data.
Rodríguez-Martín B; Palumbo E; Marco-Sola S; Griebel T; Ribeca P; Alonso G; Rastrojo A; Aguado B; Guigó R; Djebali S
BMC Genomics; 2017 Jan; 18(1):7. PubMed ID: 28049418
[TBL] [Abstract][Full Text] [Related]
6. ChiTaRS-3.1-the enhanced chimeric transcripts and RNA-seq database matched with protein-protein interactions.
Gorohovski A; Tagore S; Palande V; Malka A; Raviv-Shay D; Frenkel-Morgenstern M
Nucleic Acids Res; 2017 Jan; 45(D1):D790-D795. PubMed ID: 27899596
[TBL] [Abstract][Full Text] [Related]
7. ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data.
Frenkel-Morgenstern M; Gorohovski A; Lacroix V; Rogers M; Ibanez K; Boullosa C; Andres Leon E; Ben-Hur A; Valencia A
Nucleic Acids Res; 2013 Jan; 41(Database issue):D142-51. PubMed ID: 23143107
[TBL] [Abstract][Full Text] [Related]
8. RBM6-RBM5 transcription-induced chimeras are differentially expressed in tumours.
Wang K; Ubriaco G; Sutherland LC
BMC Genomics; 2007 Oct; 8():348. PubMed ID: 17908320
[TBL] [Abstract][Full Text] [Related]
9. A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells.
Li H; Wang J; Mor G; Sklar J
Science; 2008 Sep; 321(5894):1357-61. PubMed ID: 18772439
[TBL] [Abstract][Full Text] [Related]
10. Chimeric RNAs as potential biomarkers for tumor diagnosis.
Zhou J; Liao J; Zheng X; Shen H
BMB Rep; 2012 Mar; 45(3):133-40. PubMed ID: 22449698
[TBL] [Abstract][Full Text] [Related]
11. Intergenic Splicing between Four Adjacent
Hu DG; Hulin JA; Wijayakumara DD; McKinnon RA; Mackenzie PI; Meech R
Mol Pharmacol; 2018 Sep; 94(3):938-952. PubMed ID: 29959221
[TBL] [Abstract][Full Text] [Related]
12. It Is Imperative to Establish a Pellucid Definition of Chimeric RNA and to Clear Up a Lot of Confusion in the Relevant Research.
Yuan C; Han Y; Zellmer L; Yang W; Guan Z; Yu W; Huang H; Liao DJ
Int J Mol Sci; 2017 Mar; 18(4):. PubMed ID: 28350330
[TBL] [Abstract][Full Text] [Related]
13. ChiTaRS 2.1--an improved database of the chimeric transcripts and RNA-seq data with novel sense-antisense chimeric RNA transcripts.
Frenkel-Morgenstern M; Gorohovski A; Vucenovic D; Maestre L; Valencia A
Nucleic Acids Res; 2015 Jan; 43(Database issue):D68-75. PubMed ID: 25414346
[TBL] [Abstract][Full Text] [Related]
14. InFusion: Advancing Discovery of Fusion Genes and Chimeric Transcripts from Deep RNA-Sequencing Data.
Okonechnikov K; Imai-Matsushima A; Paul L; Seitz A; Meyer TF; Garcia-Alcalde F
PLoS One; 2016; 11(12):e0167417. PubMed ID: 27907167
[TBL] [Abstract][Full Text] [Related]
15. Chimeric RNAs generated by intergenic splicing in normal and cancer cells.
Jividen K; Li H
Genes Chromosomes Cancer; 2014 Dec; 53(12):963-71. PubMed ID: 25131334
[TBL] [Abstract][Full Text] [Related]
16. ChiPPI: a novel method for mapping chimeric protein-protein interactions uncovers selection principles of protein fusion events in cancer.
Frenkel-Morgenstern M; Gorohovski A; Tagore S; Sekar V; Vazquez M; Valencia A
Nucleic Acids Res; 2017 Jul; 45(12):7094-7105. PubMed ID: 28549153
[TBL] [Abstract][Full Text] [Related]
17. FUSIM: a software tool for simulating fusion transcripts.
Bruno AE; Miecznikowski JC; Qin M; Wang J; Liu S
BMC Bioinformatics; 2013 Jan; 14():13. PubMed ID: 23323884
[TBL] [Abstract][Full Text] [Related]
18. Recurrent chimeric fusion RNAs in non-cancer tissues and cells.
Babiceanu M; Qin F; Xie Z; Jia Y; Lopez K; Janus N; Facemire L; Kumar S; Pang Y; Qi Y; Lazar IM; Li H
Nucleic Acids Res; 2016 Apr; 44(6):2859-72. PubMed ID: 26837576
[TBL] [Abstract][Full Text] [Related]
19. Chimeric RNAs in cancer.
Shi X; Singh S; Lin E; Li H
Adv Clin Chem; 2021; 100():1-35. PubMed ID: 33453863
[TBL] [Abstract][Full Text] [Related]
20. The Fusion of
Dhungel BP; Monteuuis G; Giardina C; Tabar MS; Feng Y; Metierre C; Ho S; Nagarajah R; Fontaine ARM; Shah JS; Gokal D; Bailey CG; Schmitz U; Rasko JEJ
Int J Mol Sci; 2021 Nov; 22(22):. PubMed ID: 34830054
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
