These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

178 related articles for article (PubMed ID: 22697243)

  • 1. Algorithm to identify frequent coupled modules from two-layered network series: application to study transcription and splicing coupling.
    Li W; Dai C; Liu CC; Zhou XJ
    J Comput Biol; 2012 Jun; 19(6):710-30. PubMed ID: 22697243
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Integrating many co-splicing networks to reconstruct splicing regulatory modules.
    Dai C; Li W; Liu J; Zhou XJ
    BMC Syst Biol; 2012; 6 Suppl 1(Suppl 1):S17. PubMed ID: 23046974
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Integrative analysis of many weighted co-expression networks using tensor computation.
    Li W; Liu CC; Zhang T; Li H; Waterman MS; Zhou XJ
    PLoS Comput Biol; 2011 Jun; 7(6):e1001106. PubMed ID: 21698123
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A new multi-scale method to reveal hierarchical modular structures in biological networks.
    Jiao QJ; Huang Y; Shen HB
    Mol Biosyst; 2016 Nov; 12(12):3724-3733. PubMed ID: 27783080
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Feature related multi-view nonnegative matrix factorization for identifying conserved functional modules in multiple biological networks.
    Wang P; Gao L; Hu Y; Li F
    BMC Bioinformatics; 2018 Oct; 19(1):394. PubMed ID: 30373534
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Pattern Discovery in Multilayer Networks.
    Ren Y; Sarkar A; Veltri P; Ay A; Dobra A; Kahveci T
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(2):741-752. PubMed ID: 34398763
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identification of regulatory modules in genome scale transcription regulatory networks.
    Song Q; Grene R; Heath LS; Li S
    BMC Syst Biol; 2017 Dec; 11(1):140. PubMed ID: 29246163
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
    He J; Li C; Ye B; Zhong W
    BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Revealing the hidden relationship by sparse modules in complex networks with a large-scale analysis.
    Jiao QJ; Huang Y; Liu W; Wang XF; Chen XS; Shen HB
    PLoS One; 2013; 8(6):e66020. PubMed ID: 23762457
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Computational Identification of Tissue-Specific Splicing Regulatory Elements in Human Genes from RNA-Seq Data.
    Badr E; ElHefnawi M; Heath LS
    PLoS One; 2016; 11(11):e0166978. PubMed ID: 27861625
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A multi-objective genetic algorithm to find active modules in multiplex biological networks.
    Novoa-Del-Toro EM; Mezura-Montes E; Vignes M; Térézol M; Magdinier F; Tichit L; Baudot A
    PLoS Comput Biol; 2021 Aug; 17(8):e1009263. PubMed ID: 34460810
    [TBL] [Abstract][Full Text] [Related]  

  • 12. An novel frequent probability pattern mining algorithm based on circuit simulation method in uncertain biological networks.
    He J; Wang C; Qiu K; Zhong W
    BMC Syst Biol; 2014; 8 Suppl 3(Suppl 3):S6. PubMed ID: 25350277
    [TBL] [Abstract][Full Text] [Related]  

  • 13. CoSpliceNet: a framework for co-splicing network inference from transcriptomics data.
    Aghamirzaie D; Collakova E; Li S; Grene R
    BMC Genomics; 2016 Oct; 17(1):845. PubMed ID: 27793091
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A graph-based approach to systematically reconstruct human transcriptional regulatory modules.
    Yan X; Mehan MR; Huang Y; Waterman MS; Yu PS; Zhou XJ
    Bioinformatics; 2007 Jul; 23(13):i577-86. PubMed ID: 17646346
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Multi-Objective Optimization Algorithm to Discover Condition-Specific Modules in Multiple Networks.
    Ma X; Sun P; Zhao J
    Molecules; 2017 Dec; 22(12):. PubMed ID: 29240706
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mining coherent dense subgraphs across massive biological networks for functional discovery.
    Hu H; Yan X; Huang Y; Han J; Zhou XJ
    Bioinformatics; 2005 Jun; 21 Suppl 1():i213-21. PubMed ID: 15961460
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Coupling Graphs, Efficient Algorithms and B-Cell Epitope Prediction.
    Liang Zhao ; Hoi SC; Li Z; Wong L; Nguyen H; Li J
    IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(1):7-16. PubMed ID: 26355502
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Simultaneous clustering of multiple gene expression and physical interaction datasets.
    Narayanan M; Vetta A; Schadt EE; Zhu J
    PLoS Comput Biol; 2010 Apr; 6(4):e1000742. PubMed ID: 20419151
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context.
    Margolin AA; Nemenman I; Basso K; Wiggins C; Stolovitzky G; Dalla Favera R; Califano A
    BMC Bioinformatics; 2006 Mar; 7 Suppl 1(Suppl 1):S7. PubMed ID: 16723010
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Constructing an integrated genetic and epigenetic cellular network for whole cellular mechanism using high-throughput next-generation sequencing data.
    Chen BS; Li CW
    BMC Syst Biol; 2016 Feb; 10():18. PubMed ID: 26897165
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.