213 related articles for article (PubMed ID: 22706672)
1. ViBE-Z: a framework for 3D virtual colocalization analysis in zebrafish larval brains.
Ronneberger O; Liu K; Rath M; Rueβ D; Mueller T; Skibbe H; Drayer B; Schmidt T; Filippi A; Nitschke R; Brox T; Burkhardt H; Driever W
Nat Methods; 2012 Jun; 9(7):735-42. PubMed ID: 22706672
[TBL] [Abstract][Full Text] [Related]
2. A novel non-rigid registration algorithm for zebrafish larval images.
Ghosal S; Banerjee S; Tiso N; Grisan E; Chowdhury AS
Annu Int Conf IEEE Eng Med Biol Soc; 2017 Jul; 2017():321-324. PubMed ID: 29059875
[TBL] [Abstract][Full Text] [Related]
3. An adaptive registration algorithm for zebrafish larval brain images.
Deb S; Tiso N; Grisan E; Chowdhury AS
Comput Methods Programs Biomed; 2022 Apr; 216():106658. PubMed ID: 35114462
[TBL] [Abstract][Full Text] [Related]
4. A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies.
Marquart GD; Tabor KM; Brown M; Strykowski JL; Varshney GK; LaFave MC; Mueller T; Burgess SM; Higashijima S; Burgess HA
Front Neural Circuits; 2015; 9():78. PubMed ID: 26635538
[TBL] [Abstract][Full Text] [Related]
5. 3D Light-Sheet Fluorescence Microscopy of Cranial Neurons and Vasculature during Zebrafish Embryogenesis.
Park OK; Kwak J; Jung YJ; Kim YH; Hong HS; Hwang BJ; Kwon SH; Kee Y
Mol Cells; 2015 Nov; 38(11):975-81. PubMed ID: 26429501
[TBL] [Abstract][Full Text] [Related]
6. Three-dimensional multi-gene expression maps reveal cell fate changes associated with laterality reversal of zebrafish habenula.
Wang GT; Pan HY; Lang WH; Yu YD; Hsieh CH; Kuan YS
J Neurosci Res; 2021 Jun; 99(6):1632-1645. PubMed ID: 33638209
[TBL] [Abstract][Full Text] [Related]
7. Imaging and 3D reconstruction of cerebrovascular structures in embryonic zebrafish.
Ethell DW; Cameron DJ
J Vis Exp; 2014 Apr; (86):. PubMed ID: 24797110
[TBL] [Abstract][Full Text] [Related]
8. Rapid whole brain imaging of neural activity in freely behaving larval zebrafish (
Cong L; Wang Z; Chai Y; Hang W; Shang C; Yang W; Bai L; Du J; Wang K; Wen Q
Elife; 2017 Sep; 6():. PubMed ID: 28930070
[TBL] [Abstract][Full Text] [Related]
9. Expression of the paralogous tyrosine hydroxylase encoding genes th1 and th2 reveals the full complement of dopaminergic and noradrenergic neurons in zebrafish larval and juvenile brain.
Filippi A; Mahler J; Schweitzer J; Driever W
J Comp Neurol; 2010 Feb; 518(4):423-38. PubMed ID: 20017209
[TBL] [Abstract][Full Text] [Related]
10. A Cellular-Resolution Atlas of the Larval Zebrafish Brain.
Kunst M; Laurell E; Mokayes N; Kramer A; Kubo F; Fernandes AM; Förster D; Dal Maschio M; Baier H
Neuron; 2019 Jul; 103(1):21-38.e5. PubMed ID: 31147152
[TBL] [Abstract][Full Text] [Related]
11. High-precision registration between zebrafish brain atlases using symmetric diffeomorphic normalization.
Marquart GD; Tabor KM; Horstick EJ; Brown M; Geoca AK; Polys NF; Nogare DD; Burgess HA
Gigascience; 2017 Aug; 6(8):1-15. PubMed ID: 28873968
[TBL] [Abstract][Full Text] [Related]
12. BrainAligner: 3D registration atlases of Drosophila brains.
Peng H; Chung P; Long F; Qu L; Jenett A; Seeds AM; Myers EW; Simpson JH
Nat Methods; 2011 Jun; 8(6):493-500. PubMed ID: 21532582
[TBL] [Abstract][Full Text] [Related]
13. larvalign: Aligning Gene Expression Patterns from the Larval Brain of Drosophila melanogaster.
Muenzing SEA; Strauch M; Truman JW; Bühler K; Thum AS; Merhof D
Neuroinformatics; 2018 Jan; 16(1):65-80. PubMed ID: 29127664
[TBL] [Abstract][Full Text] [Related]
14. Integrating anatomy and function for zebrafish circuit analysis.
Arrenberg AB; Driever W
Front Neural Circuits; 2013; 7():74. PubMed ID: 23630469
[TBL] [Abstract][Full Text] [Related]
15. Brain Imaging and Registration in Larval Zebrafish.
Bhandiwad AA; Gupta T; Subedi A; Heigh V; Holmes GA; Burgess HA
Methods Mol Biol; 2024; 2707():141-153. PubMed ID: 37668910
[TBL] [Abstract][Full Text] [Related]
16. A medley of gene expression adds new depth to zebrafish brain maps.
Schulze L; Zada D; Lovett-Barron M
Sci Adv; 2023 Feb; 9(8):eadg8660. PubMed ID: 36812324
[TBL] [Abstract][Full Text] [Related]
17. Towards a digital model of zebrafish embryogenesis. Integration of cell tracking and gene expression quantification.
Castro-Gonzalez C; Luengo-Oroz MA; Douloquin L; Savy T; Melani C; Desnoulez S; Ledesma-Carbayo MJ; Bourginey P; Peyrieras N; Santos A
Annu Int Conf IEEE Eng Med Biol Soc; 2010; 2010():5520-3. PubMed ID: 21096468
[TBL] [Abstract][Full Text] [Related]
18. Clinical application of 3D VIBECAIPI-DIXON for non-enhanced imaging of the pancreas compared to a standard 2D fat-saturated FLASH.
Haneder S; Koziel K; Morelli JN; Riffel P; Budjan J; Schoenberg SO; Michaely HJ
Clin Imaging; 2014; 38(2):142-7. PubMed ID: 24332974
[TBL] [Abstract][Full Text] [Related]
19. Quantification of neuronal density across cortical depth using automated 3D analysis of confocal image stacks.
Kelly JG; Hawken MJ
Brain Struct Funct; 2017 Sep; 222(7):3333-3353. PubMed ID: 28243763
[TBL] [Abstract][Full Text] [Related]
20. Automated identification of neurons in 3D confocal datasets from zebrafish brainstem.
Kamali M; Day LJ; Brooks DH; Zhou X; O'Malley DM
J Microsc; 2009 Jan; 233(1):114-31. PubMed ID: 19196418
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
