These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

68 related articles for article (PubMed ID: 22743225)

  • 1. Targeted retrieval of gene expression measurements using regulatory models.
    Georgii E; Salojärvi J; Brosché M; Kangasjärvi J; Kaski S
    Bioinformatics; 2012 Sep; 28(18):2349-56. PubMed ID: 22743225
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Modelling-based experiment retrieval: a case study with gene expression clustering.
    Blomstedt P; Dutta R; Seth S; Brazma A; Kaski S
    Bioinformatics; 2016 May; 32(9):1388-94. PubMed ID: 26740526
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computer-assisted curation of a human regulatory core network from the biological literature.
    Thomas P; Durek P; Solt I; Klinger B; Witzel F; Schulthess P; Mayer Y; Tikk D; Blüthgen N; Leser U
    Bioinformatics; 2015 Apr; 31(8):1258-66. PubMed ID: 25433699
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Discriminating response groups in metabolic and regulatory pathway networks.
    Van Hemert JL; Dickerson JA
    Bioinformatics; 2012 Apr; 28(7):947-54. PubMed ID: 22308149
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Data-driven mechanistic analysis method to reveal dynamically evolving regulatory networks.
    Intosalmi J; Nousiainen K; Ahlfors H; Lähdesmäki H
    Bioinformatics; 2016 Jun; 32(12):i288-i296. PubMed ID: 27307629
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Hierarchical generative biclustering for microRNA expression analysis.
    Caldas J; Kaski S
    J Comput Biol; 2011 Mar; 18(3):251-61. PubMed ID: 21385032
    [TBL] [Abstract][Full Text] [Related]  

  • 7. GENIUS: web server to predict local gene networks and key genes for biological functions.
    Puelma T; Araus V; Canales J; Vidal EA; Cabello JM; Soto A; Gutiérrez RA
    Bioinformatics; 2017 Mar; 33(5):760-761. PubMed ID: 27993775
    [TBL] [Abstract][Full Text] [Related]  

  • 8. AraNet: A Network Biology Server for Arabidopsis thaliana and Other Non-Model Plant Species.
    Lee T; Lee I
    Methods Mol Biol; 2017; 1629():225-238. PubMed ID: 28623589
    [TBL] [Abstract][Full Text] [Related]  

  • 9. CAGER: classification analysis of gene expression regulation using multiple information sources.
    Ruan J; Zhang W
    BMC Bioinformatics; 2005 May; 6():114. PubMed ID: 15890068
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Maximizing capture of gene co-expression relationships through pre-clustering of input expression samples: an Arabidopsis case study.
    Feltus FA; Ficklin SP; Gibson SM; Smith MC
    BMC Syst Biol; 2013 Jun; 7():44. PubMed ID: 23738693
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Integrative platform to translate gene sets to networks.
    Laakso M; Hautaniemi S
    Bioinformatics; 2010 Jul; 26(14):1802-3. PubMed ID: 20507894
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identifying functional gene sets from hierarchically clustered expression data: map of abiotic stress regulated genes in Arabidopsis thaliana.
    Kankainen M; Brader G; Törönen P; Palva ET; Holm L
    Nucleic Acids Res; 2006; 34(18):e124. PubMed ID: 17003050
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Drug response prediction by inferring pathway-response associations with kernelized Bayesian matrix factorization.
    Ammad-Ud-Din M; Khan SA; Malani D; Murumägi A; Kallioniemi O; Aittokallio T; Kaski S
    Bioinformatics; 2016 Sep; 32(17):i455-i463. PubMed ID: 27587662
    [TBL] [