147 related articles for article (PubMed ID: 22753776)
1. Features for computational operon prediction in prokaryotes.
Chuang LY; Chang HW; Tsai JH; Yang CH
Brief Funct Genomics; 2012 Jul; 11(4):291-9. PubMed ID: 22753776
[TBL] [Abstract][Full Text] [Related]
2. A multi-approaches-guided genetic algorithm with application to operon prediction.
Wang S; Wang Y; Du W; Sun F; Wang X; Zhou C; Liang Y
Artif Intell Med; 2007 Oct; 41(2):151-9. PubMed ID: 17869072
[TBL] [Abstract][Full Text] [Related]
3. A novel method for accurate operon predictions in all sequenced prokaryotes.
Price MN; Huang KH; Alm EJ; Arkin AP
Nucleic Acids Res; 2005; 33(3):880-92. PubMed ID: 15701760
[TBL] [Abstract][Full Text] [Related]
4. Operon prediction based on SVM.
Zhang GQ; Cao ZW; Luo QM; Cai YD; Li YX
Comput Biol Chem; 2006 Jun; 30(3):233-40. PubMed ID: 16716751
[TBL] [Abstract][Full Text] [Related]
5. The distinctive signatures of promoter regions and operon junctions across prokaryotes.
Janga SC; Lamboy WF; Huerta AM; Moreno-Hagelsieb G
Nucleic Acids Res; 2006; 34(14):3980-7. PubMed ID: 16914446
[TBL] [Abstract][Full Text] [Related]
6. Operon prediction in Pyrococcus furiosus.
Tran TT; Dam P; Su Z; Poole FL; Adams MW; Zhou GT; Xu Y
Nucleic Acids Res; 2007; 35(1):11-20. PubMed ID: 17148478
[TBL] [Abstract][Full Text] [Related]
7. Conservation of gene co-regulation between two prokaryotes: Bacillus subtilis and Escherichia coli.
Okuda S; Kawashima S; Goto S; Kanehisa M
Genome Inform; 2005; 16(1):116-24. PubMed ID: 16362913
[TBL] [Abstract][Full Text] [Related]
8. Operon prediction using both genome-specific and general genomic information.
Dam P; Olman V; Harris K; Su Z; Xu Y
Nucleic Acids Res; 2007; 35(1):288-98. PubMed ID: 17170009
[TBL] [Abstract][Full Text] [Related]
9. Detection of operons.
Yan Y; Moult J
Proteins; 2006 Aug; 64(3):615-28. PubMed ID: 16755590
[TBL] [Abstract][Full Text] [Related]
10. On application of directons to functional classification of genes in prokaryotes.
Wu H; Mao F; Olman V; Xu Y
Comput Biol Chem; 2008 Jun; 32(3):176-84. PubMed ID: 18440870
[TBL] [Abstract][Full Text] [Related]
11. A novel method for prokaryotic promoter prediction based on DNA stability.
Kanhere A; Bansal M
BMC Bioinformatics; 2005 Jan; 6():1. PubMed ID: 15631638
[TBL] [Abstract][Full Text] [Related]
12. Inferring regulatory elements from a whole genome. An analysis of Helicobacter pylori sigma(80) family of promoter signals.
Vanet A; Marsan L; Labigne A; Sagot MF
J Mol Biol; 2000 Mar; 297(2):335-53. PubMed ID: 10715205
[TBL] [Abstract][Full Text] [Related]
13. Conservation of adjacency as evidence of paralogous operons.
Janga SC; Moreno-Hagelsieb G
Nucleic Acids Res; 2004; 32(18):5392-7. PubMed ID: 15477389
[TBL] [Abstract][Full Text] [Related]
14. Comparative pathway annotation with protein-DNA interaction and operon information via graph tree decomposition.
Zhao J; Che D; Cai L
Pac Symp Biocomput; 2007; ():496-507. PubMed ID: 17990513
[TBL] [Abstract][Full Text] [Related]
15. Operon prediction by Markov clustering.
Du W; Cao Z; Wang Y; Blanzieri E; Zhang C; Liang Y
Int J Data Min Bioinform; 2014; 9(4):424-43. PubMed ID: 25757249
[TBL] [Abstract][Full Text] [Related]
16. Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context.
Moreno-Hagelsieb G; Collado-Vides J
In Silico Biol; 2002; 2(2):87-95. PubMed ID: 12066843
[TBL] [Abstract][Full Text] [Related]
17. The relative value of operon predictions.
Brouwer RW; Kuipers OP; van Hijum SA
Brief Bioinform; 2008 Sep; 9(5):367-75. PubMed ID: 18420711
[TBL] [Abstract][Full Text] [Related]
18. Integrating genomic data to predict transcription factor binding.
Holloway DT; Kon M; DeLisi C
Genome Inform; 2005; 16(1):83-94. PubMed ID: 16362910
[TBL] [Abstract][Full Text] [Related]
19. A compression-based approach for coding sequences identification. I. Application to prokaryotic genomes.
Menconi G; Marangoni R
J Comput Biol; 2006 Oct; 13(8):1477-88. PubMed ID: 17061923
[TBL] [Abstract][Full Text] [Related]
20. Computational prediction of operons in Synechococcus sp. WH8102.
Chen X; Su Z; Xu Y; Jiang T
Genome Inform; 2004; 15(2):211-22. PubMed ID: 15706507
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]