These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

88 related articles for article (PubMed ID: 2280264)

  • 1. Automated conformational analysis: algorithms for the efficient construction of low-energy conformations.
    Leach AR; Prout K; Dolata DP
    J Comput Aided Mol Des; 1990 Sep; 4(3):271-82. PubMed ID: 2280264
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CONFECT: conformations from an expert collection of torsion patterns.
    Schärfer C; Schulz-Gasch T; Hert J; Heinzerling L; Schulz B; Inhester T; Stahl M; Rarey M
    ChemMedChem; 2013 Oct; 8(10):1690-700. PubMed ID: 23929679
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A parallel systematic-Monte Carlo algorithm for exploring conformational space.
    Perez-Riverol Y; Vera R; Mazola Y; Musacchio A
    Curr Top Med Chem; 2012; 12(16):1790-6. PubMed ID: 23030613
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Structure design: an artificial intelligence-based method for the design of molecules under geometrical constraints.
    Cohen AA; Shatzmiller SE
    J Mol Graph; 1993 Sep; 11(3):166-73. PubMed ID: 8110662
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An exploration of a novel strategy for superposing several flexible molecules.
    Perkins TD; Dean PM
    J Comput Aided Mol Des; 1993 Apr; 7(2):155-72. PubMed ID: 8320554
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A Novel Method Using Abstract Convex Underestimation in Ab-Initio Protein Structure Prediction for Guiding Search in Conformational Feature Space.
    Hao XH; Zhang GJ; Zhou XG; Yu XF
    IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(5):887-900. PubMed ID: 26552093
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Conformational searching using a population-based incremental learning algorithm.
    Long SM; Tran TT; Adams P; Darwen P; Smythe ML
    J Comput Chem; 2011 Jun; 32(8):1541-9. PubMed ID: 21284005
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Eurecon: Equidistant uniform rigid-body ensemble constructor.
    Popov P; Grudinin S
    J Mol Graph Model; 2018 Mar; 80():313-319. PubMed ID: 29427936
    [TBL] [Abstract][Full Text] [Related]  

  • 9. On searching in, sampling of, and dynamically moving through conformational space of biomolecular systems: A review.
    Christen M; van Gunsteren WF
    J Comput Chem; 2008 Jan; 29(2):157-66. PubMed ID: 17570138
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Comparison of knowledge-based and distance geometry approaches for generation of molecular conformations.
    Feuston BP; Miller MD; Culberson JC; Nachbar RB; Kearsley SK
    J Chem Inf Comput Sci; 2001; 41(3):754-63. PubMed ID: 11410056
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Local elevation: a method for improving the searching properties of molecular dynamics simulation.
    Huber T; Torda AE; van Gunsteren WF
    J Comput Aided Mol Des; 1994 Dec; 8(6):695-708. PubMed ID: 7738605
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Conformational energy downward driver (CEDD): characterization and calibration of the method.
    Jaeger EP; Peterson ML; Treasurywala AM
    J Comput Aided Mol Des; 1995 Feb; 9(1):55-64. PubMed ID: 7751870
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Molecular properties from conformational ensembles. 1. Dipole moments of molecules with multiple internal rotations.
    Lavy T; Harries D; Goldblum A
    J Phys Chem A; 2011 Jun; 115(23):5794-809. PubMed ID: 21210653
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Maximum entropy approach to the determination of solution conformation of flexible polypeptides by global conformational analysis and NMR spectroscopy--application to DNS1-c-[D-A2,bu2,Trp4,Leu5]enkephalin and DNS1-c-[D-A2bu2,Trp4,D-Leu5]enkephalin.
    Groth M; Malicka J; Czaplewski C; Ołdziej S; Lankiewicz L; Wiczk W; Liwo A
    J Biomol NMR; 1999 Dec; 15(4):315-30. PubMed ID: 10685340
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Conformational search by potential energy annealing: algorithm and application to cyclosporin A.
    van Schaik RC; van Gunsteren WF; Berendsen HJ
    J Comput Aided Mol Des; 1992 Apr; 6(2):97-112. PubMed ID: 1624960
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Energy-directed tree search: an efficient systematic algorithm for finding the lowest energy conformation of molecules.
    Izgorodina EI; Lin CY; Coote ML
    Phys Chem Chem Phys; 2007 May; 9(20):2507-16. PubMed ID: 17508083
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Flexible ligand docking using conformational ensembles.
    Lorber DM; Shoichet BK
    Protein Sci; 1998 Apr; 7(4):938-50. PubMed ID: 9568900
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Automatic discovery of metastable states for the construction of Markov models of macromolecular conformational dynamics.
    Chodera JD; Singhal N; Pande VS; Dill KA; Swope WC
    J Chem Phys; 2007 Apr; 126(15):155101. PubMed ID: 17461665
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A genetic algorithm encoded with the structural information of amino acids and dipeptides for efficient conformational searches of oligopeptides.
    Ru X; Song C; Lin Z
    J Comput Chem; 2016 May; 37(13):1214-22. PubMed ID: 26833761
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Ab initio construction of all-atom loop conformations.
    Jiang H; Blouin C
    J Mol Model; 2006 Jan; 12(2):221-8. PubMed ID: 16247602
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.