169 related articles for article (PubMed ID: 22815356)
21. A space-efficient algorithm for aligning large genomic sequences.
Morgenstern B
Bioinformatics; 2000 Oct; 16(10):948-9. PubMed ID: 11120687
[TBL] [Abstract][Full Text] [Related]
22. BRIGEP--the BRIDGE-based genome-transcriptome-proteome browser.
Goesmann A; Linke B; Bartels D; Dondrup M; Krause L; Neuweger H; Oehm S; Paczian T; Wilke A; Meyer F
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W710-6. PubMed ID: 15980569
[TBL] [Abstract][Full Text] [Related]
23. DCA: an efficient implementation of the divide-and-conquer approach to simultaneous multiple sequence alignment.
Stoye J; Moulton V; Dress AW
Comput Appl Biosci; 1997 Dec; 13(6):625-6. PubMed ID: 9475994
[TBL] [Abstract][Full Text] [Related]
24. Perfect sorting by reversals is not always difficult.
Bérard S; Bergeron A; Chauve C; Paul C
IEEE/ACM Trans Comput Biol Bioinform; 2007; 4(1):4-16. PubMed ID: 17277409
[TBL] [Abstract][Full Text] [Related]
25. An Exact Algorithm to Compute the Double-Cut-and-Join Distance for Genomes with Duplicate Genes.
Shao M; Lin Y; Moret BM
J Comput Biol; 2015 May; 22(5):425-35. PubMed ID: 25517208
[TBL] [Abstract][Full Text] [Related]
26. Approximating the DCJ distance of balanced genomes in linear time.
Rubert DP; Feijão P; Braga MDV; Stoye J; Martinez FHV
Algorithms Mol Biol; 2017; 12():3. PubMed ID: 28293275
[TBL] [Abstract][Full Text] [Related]
27. On the weight of indels in genomic distances.
Braga MD; Machado R; Ribeiro LC; Stoye J
BMC Bioinformatics; 2011 Oct; 12 Suppl 9(Suppl 9):S13. PubMed ID: 22151784
[TBL] [Abstract][Full Text] [Related]
28. Computing the family-free DCJ similarity.
Rubert DP; Hoshino EA; Braga MDV; Stoye J; Martinez FV
BMC Bioinformatics; 2018 May; 19(Suppl 6):152. PubMed ID: 29745861
[TBL] [Abstract][Full Text] [Related]
29. Genomic distance under gene substitutions.
Braga MD; Machado R; Ribeiro LC; Stoye J
BMC Bioinformatics; 2011 Oct; 12 Suppl 9(Suppl 9):S8. PubMed ID: 22151231
[TBL] [Abstract][Full Text] [Related]
30. DCJ-Indel sorting revisited.
Compeau PE
Algorithms Mol Biol; 2013 Mar; 8(1):6. PubMed ID: 23452758
[TBL] [Abstract][Full Text] [Related]
31. DIALIGN: multiple DNA and protein sequence alignment at BiBiServ.
Morgenstern B
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W33-6. PubMed ID: 15215344
[TBL] [Abstract][Full Text] [Related]
32. Genome dedoubling by DCJ and reversal.
Thomas A; Varré JS; Ouangraoua A
BMC Bioinformatics; 2011 Oct; 12 Suppl 9(Suppl 9):S20. PubMed ID: 22152053
[TBL] [Abstract][Full Text] [Related]
33. Generalizations of the genomic rank distance to indels.
Pereira Zanetti JP; Peres Oliveira L; Chindelevitch L; Meidanis J
Bioinformatics; 2023 Mar; 39(3):. PubMed ID: 36790056
[TBL] [Abstract][Full Text] [Related]
34. An algorithm for linear metabolic pathway alignment.
Chen M; Hofestaedt R
In Silico Biol; 2005; 5(2):111-28. PubMed ID: 15972016
[TBL] [Abstract][Full Text] [Related]
35. Algebraic double cut and join : A group-theoretic approach to the operator on multichromosomal genomes.
Bhatia S; Egri-Nagy A; Francis AR
J Math Biol; 2015 Nov; 71(5):1149-78. PubMed ID: 25502846
[TBL] [Abstract][Full Text] [Related]
36. SCJ: a breakpoint-like distance that simplifies several rearrangement problems.
Feijão P; Meidanis J
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(5):1318-29. PubMed ID: 21339538
[TBL] [Abstract][Full Text] [Related]
37. DCJ-RNA - double cut and join for RNA secondary structures.
Badr GH; Al-Aqel HA
BMC Bioinformatics; 2017 Oct; 18(Suppl 12):427. PubMed ID: 29072145
[TBL] [Abstract][Full Text] [Related]
38. synbreed: a framework for the analysis of genomic prediction data using R.
Wimmer V; Albrecht T; Auinger HJ; Schön CC
Bioinformatics; 2012 Aug; 28(15):2086-7. PubMed ID: 22689388
[TBL] [Abstract][Full Text] [Related]
39. A general framework for genome rearrangement with biological constraints.
Simonaitis P; Chateau A; Swenson KM
Algorithms Mol Biol; 2019; 14():15. PubMed ID: 31360217
[TBL] [Abstract][Full Text] [Related]
40. Double cut and join with insertions and deletions.
Braga MD; Willing E; Stoye J
J Comput Biol; 2011 Sep; 18(9):1167-84. PubMed ID: 21899423
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
