152 related articles for article (PubMed ID: 22847933)
1. An integrated approach to reduce the impact of minor allele frequency and linkage disequilibrium on variable importance measures for genome-wide data.
Walters R; Laurin C; Lubke GH
Bioinformatics; 2012 Oct; 28(20):2615-23. PubMed ID: 22847933
[TBL] [Abstract][Full Text] [Related]
2. Performance of random forest when SNPs are in linkage disequilibrium.
Meng YA; Yu Y; Cupples LA; Farrer LA; Lunetta KL
BMC Bioinformatics; 2009 Mar; 10():78. PubMed ID: 19265542
[TBL] [Abstract][Full Text] [Related]
3. The expected power of genome-wide linkage disequilibrium testing using single nucleotide polymorphism markers for detecting a low-frequency disease variant.
Ohashi J; Tokunaga K
Ann Hum Genet; 2002 Jul; 66(Pt 4):297-306. PubMed ID: 12418970
[TBL] [Abstract][Full Text] [Related]
4. Performance of a blockwise approach in variable selection using linkage disequilibrium information.
Dehman A; Ambroise C; Neuvial P
BMC Bioinformatics; 2015 May; 16():148. PubMed ID: 25951947
[TBL] [Abstract][Full Text] [Related]
5. High imputation accuracy from informative low-to-medium density single nucleotide polymorphism genotypes is achievable in sheep1.
O'Brien AC; Judge MM; Fair S; Berry DP
J Anim Sci; 2019 Apr; 97(4):1550-1567. PubMed ID: 30722011
[TBL] [Abstract][Full Text] [Related]
6. SNPrune: an efficient algorithm to prune large SNP array and sequence datasets based on high linkage disequilibrium.
Calus MPL; Vandenplas J
Genet Sel Evol; 2018 Jun; 50(1):34. PubMed ID: 29940846
[TBL] [Abstract][Full Text] [Related]
7. Extent of genome-wide linkage disequilibrium in Australian Holstein-Friesian cattle based on a high-density SNP panel.
Khatkar MS; Nicholas FW; Collins AR; Zenger KR; Cavanagh JA; Barris W; Schnabel RD; Taylor JF; Raadsma HW
BMC Genomics; 2008 Apr; 9():187. PubMed ID: 18435834
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide linkage disequilibrium from 100,000 SNPs in the East Finland founder population.
Uimari P; Kontkanen O; Visscher PM; Pirskanen M; Fuentes R; Salonen JT
Twin Res Hum Genet; 2005 Jun; 8(3):185-97. PubMed ID: 15989746
[TBL] [Abstract][Full Text] [Related]
9. Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies.
Duggal P; Gillanders EM; Holmes TN; Bailey-Wilson JE
BMC Genomics; 2008 Oct; 9():516. PubMed ID: 18976480
[TBL] [Abstract][Full Text] [Related]
10. Comparing the efficacy of SNP filtering methods for identifying a single causal SNP in a known association region.
Spencer AV; Cox A; Walters K
Ann Hum Genet; 2014 Jan; 78(1):50-61. PubMed ID: 24205929
[TBL] [Abstract][Full Text] [Related]
11. Weighted SNP set analysis in genome-wide association study.
Dai H; Zhao Y; Qian C; Cai M; Zhang R; Chu M; Dai J; Hu Z; Shen H; Chen F
PLoS One; 2013; 8(9):e75897. PubMed ID: 24098741
[TBL] [Abstract][Full Text] [Related]
12. Selecting Closely-Linked SNPs Based on Local Epistatic Effects for Haplotype Construction Improves Power of Association Mapping.
Liu F; Schmidt RH; Reif JC; Jiang Y
G3 (Bethesda); 2019 Dec; 9(12):4115-4126. PubMed ID: 31604824
[TBL] [Abstract][Full Text] [Related]
13. Variation of gene-based SNPs and linkage disequilibrium patterns in the human genome.
Tsunoda T; Lathrop GM; Sekine A; Yamada R; Takahashi A; Ohnishi Y; Tanaka T; Nakamura Y
Hum Mol Genet; 2004 Aug; 13(15):1623-32. PubMed ID: 15190013
[TBL] [Abstract][Full Text] [Related]
14. Assessment and implications of linkage disequilibrium in genome-wide single-nucleotide polymorphism and microsatellite panels.
Goode EL; Jarvik GP
Genet Epidemiol; 2005; 29 Suppl 1():S72-6. PubMed ID: 16342185
[TBL] [Abstract][Full Text] [Related]
15. Use of genome-wide heterospecific single-nucleotide polymorphisms to estimate linkage disequilibrium in rhesus and cynomolgus macaques.
Ng J; Trask JS; Houghton P; Smith DG; Kanthaswamy S
Comp Med; 2015 Feb; 65(1):62-9. PubMed ID: 25730759
[TBL] [Abstract][Full Text] [Related]
16. Implication of next-generation sequencing on association studies.
Siu H; Zhu Y; Jin L; Xiong M
BMC Genomics; 2011 Jun; 12():322. PubMed ID: 21682891
[TBL] [Abstract][Full Text] [Related]
17. Linkage Disequilibrium and Evaluation of Genome-Wide Association Mapping Models in Tetraploid Potato.
Sharma SK; MacKenzie K; McLean K; Dale F; Daniels S; Bryan GJ
G3 (Bethesda); 2018 Oct; 8(10):3185-3202. PubMed ID: 30082329
[TBL] [Abstract][Full Text] [Related]
18. Transethnic differences in GWAS signals: A simulation study.
Zanetti D; Weale ME
Ann Hum Genet; 2018 Sep; 82(5):280-286. PubMed ID: 29733446
[TBL] [Abstract][Full Text] [Related]
19. Compression and fast retrieval of SNP data.
Sambo F; Di Camillo B; Toffolo G; Cobelli C
Bioinformatics; 2014 Nov; 30(21):3078-85. PubMed ID: 25064564
[TBL] [Abstract][Full Text] [Related]
20. POLARIS: Polygenic LD-adjusted risk score approach for set-based analysis of GWAS data.
Baker E; Schmidt KM; Sims R; O'Donovan MC; Williams J; Holmans P; Escott-Price V; Consortium WTG
Genet Epidemiol; 2018 Jun; 42(4):366-377. PubMed ID: 29532500
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
