These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

173 related articles for article (PubMed ID: 22888776)

  • 1. Cloudgene: a graphical execution platform for MapReduce programs on private and public clouds.
    Schönherr S; Forer L; Weißensteiner H; Kronenberg F; Specht G; Kloss-Brandstätter A
    BMC Bioinformatics; 2012 Aug; 13():200. PubMed ID: 22888776
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CloudDOE: a user-friendly tool for deploying Hadoop clouds and analyzing high-throughput sequencing data with MapReduce.
    Chung WC; Chen CC; Ho JM; Lin CY; Hsu WL; Wang YC; Lee DT; Lai F; Huang CW; Chang YJ
    PLoS One; 2014; 9(6):e98146. PubMed ID: 24897343
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A quantitative assessment of the Hadoop framework for analyzing massively parallel DNA sequencing data.
    Siretskiy A; Sundqvist T; Voznesenskiy M; Spjuth O
    Gigascience; 2015; 4():26. PubMed ID: 26045962
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Ultrafast and scalable cone-beam CT reconstruction using MapReduce in a cloud computing environment.
    Meng B; Pratx G; Xing L
    Med Phys; 2011 Dec; 38(12):6603-9. PubMed ID: 22149842
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Watchdog 2.0: New developments for reusability, reproducibility, and workflow execution.
    Kluge M; Friedl MS; Menzel AL; Friedel CC
    Gigascience; 2020 Jun; 9(6):. PubMed ID: 32556167
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Closha: bioinformatics workflow system for the analysis of massive sequencing data.
    Ko G; Kim PG; Yoon J; Han G; Park SJ; Song W; Lee B
    BMC Bioinformatics; 2018 Feb; 19(Suppl 1):43. PubMed ID: 29504905
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Applications of the MapReduce programming framework to clinical big data analysis: current landscape and future trends.
    Mohammed EA; Far BH; Naugler C
    BioData Min; 2014; 7():22. PubMed ID: 25383096
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Long Read Alignment with Parallel MapReduce Cloud Platform.
    Al-Absi AA; Kang DK
    Biomed Res Int; 2015; 2015():807407. PubMed ID: 26839887
    [TBL] [Abstract][Full Text] [Related]  

  • 9. mtDNA-Server: next-generation sequencing data analysis of human mitochondrial DNA in the cloud.
    Weissensteiner H; Forer L; Fuchsberger C; Schöpf B; Kloss-Brandstätter A; Specht G; Kronenberg F; Schönherr S
    Nucleic Acids Res; 2016 Jul; 44(W1):W64-9. PubMed ID: 27084948
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Pegasys: software for executing and integrating analyses of biological sequences.
    Shah SP; He DY; Sawkins JN; Druce JC; Quon G; Lett D; Zheng GX; Xu T; Ouellette BF
    BMC Bioinformatics; 2004 Apr; 5():40. PubMed ID: 15096276
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Hybrid cloud and cluster computing paradigms for life science applications.
    Qiu J; Ekanayake J; Gunarathne T; Choi JY; Bae SH; Li H; Zhang B; Wu TL; Ruan Y; Ekanayake S; Hughes A; Fox G
    BMC Bioinformatics; 2010 Dec; 11 Suppl 12(Suppl 12):S3. PubMed ID: 21210982
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Parallel MapReduce: Maximizing Cloud Resource Utilization and Performance Improvement Using Parallel Execution Strategies.
    Al-Absi AA; Al-Sammarraie NA; Shaher Yafooz WM; Kang DK
    Biomed Res Int; 2018; 2018():7501042. PubMed ID: 30417014
    [TBL] [Abstract][Full Text] [Related]  

  • 13. CloudBurst: highly sensitive read mapping with MapReduce.
    Schatz MC
    Bioinformatics; 2009 Jun; 25(11):1363-9. PubMed ID: 19357099
    [TBL] [Abstract][Full Text] [Related]  

  • 14. An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics.
    Taylor RC
    BMC Bioinformatics; 2010 Dec; 11 Suppl 12(Suppl 12):S1. PubMed ID: 21210976
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community.
    Krampis K; Booth T; Chapman B; Tiwari B; Bicak M; Field D; Nelson KE
    BMC Bioinformatics; 2012 Mar; 13():42. PubMed ID: 22429538
    [TBL] [Abstract][Full Text] [Related]  

  • 16. MarDRe: efficient MapReduce-based removal of duplicate DNA reads in the cloud.
    Expósito RR; Veiga J; González-Domínguez J; Touriño J
    Bioinformatics; 2017 Sep; 33(17):2762-2764. PubMed ID: 28475668
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Watchdog - a workflow management system for the distributed analysis of large-scale experimental data.
    Kluge M; Friedel CC
    BMC Bioinformatics; 2018 Mar; 19(1):97. PubMed ID: 29534677
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Using Hadoop MapReduce for Parallel Genetic Algorithms: A Comparison of the Global, Grid and Island Models.
    Ferrucci F; Salza P; Sarro F
    Evol Comput; 2018; 26(4):535-567. PubMed ID: 28661707
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Survey of MapReduce frame operation in bioinformatics.
    Zou Q; Li XB; Jiang WR; Lin ZY; Li GL; Chen K
    Brief Bioinform; 2014 Jul; 15(4):637-47. PubMed ID: 23396756
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Cloud-BS: A MapReduce-based bisulfite sequencing aligner on cloud.
    Choi J; Park Y; Kim S; Chae H
    J Bioinform Comput Biol; 2018 Dec; 16(6):1840028. PubMed ID: 30567473
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.