BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

231 related articles for article (PubMed ID: 22901088)

  • 1. Inference of gene regulatory subnetworks from time course gene expression data.
    Liang XJ; Xia Z; Zhang LW; Wu FX
    BMC Bioinformatics; 2012 Jun; 13 Suppl 9(Suppl 9):S3. PubMed ID: 22901088
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MICRAT: a novel algorithm for inferring gene regulatory networks using time series gene expression data.
    Yang B; Xu Y; Maxwell A; Koh W; Gong P; Zhang C
    BMC Syst Biol; 2018 Dec; 12(Suppl 7):115. PubMed ID: 30547796
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A new asynchronous parallel algorithm for inferring large-scale gene regulatory networks.
    Xiao X; Zhang W; Zou X
    PLoS One; 2015; 10(3):e0119294. PubMed ID: 25807392
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Inference of Gene Regulatory Network Based on Local Bayesian Networks.
    Liu F; Zhang SW; Guo WF; Wei ZG; Chen L
    PLoS Comput Biol; 2016 Aug; 12(8):e1005024. PubMed ID: 27479082
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Urothelial cancer gene regulatory networks inferred from large-scale RNAseq, Bead and Oligo gene expression data.
    de Matos Simoes R; Dalleau S; Williamson KE; Emmert-Streib F
    BMC Syst Biol; 2015 May; 9():21. PubMed ID: 25971253
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An improved Bayesian network method for reconstructing gene regulatory network based on candidate auto selection.
    Xing L; Guo M; Liu X; Wang C; Wang L; Zhang Y
    BMC Genomics; 2017 Nov; 18(Suppl 9):844. PubMed ID: 29219084
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Reverse engineering module networks by PSO-RNN hybrid modeling.
    Zhang Y; Xuan J; de los Reyes BG; Clarke R; Ressom HW
    BMC Genomics; 2009 Jul; 10 Suppl 1(Suppl 1):S15. PubMed ID: 19594874
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Inference of gene networks from gene expression time series using recurrent neural networks and sparse MAP estimation.
    Chen CK
    J Bioinform Comput Biol; 2018 Aug; 16(4):1850009. PubMed ID: 30051742
    [TBL] [Abstract][Full Text] [Related]  

  • 9. High-order dynamic Bayesian Network learning with hidden common causes for causal gene regulatory network.
    Lo LY; Wong ML; Lee KH; Leung KS
    BMC Bioinformatics; 2015 Nov; 16():395. PubMed ID: 26608050
    [TBL] [Abstract][Full Text] [Related]  

  • 10. SIN-KNO: A method of gene regulatory network inference using single-cell transcription and gene knockout data.
    Wang H; Lian Y; Li C; Ma Y; Yan Z; Dong C
    J Bioinform Comput Biol; 2019 Dec; 17(6):1950035. PubMed ID: 32019417
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Inference of Large-scale Time-delayed Gene Regulatory Network with Parallel MapReduce Cloud Platform.
    Yang B; Bao W; Huang DS; Chen Y
    Sci Rep; 2018 Dec; 8(1):17787. PubMed ID: 30542062
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A Sparse Reconstruction Approach for Identifying Gene Regulatory Networks Using Steady-State Experiment Data.
    Zhang W; Zhou T
    PLoS One; 2015; 10(7):e0130979. PubMed ID: 26207991
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Gene Regulatory Network-Classifier: Gene Regulatory Network-Based Classifier and Its Applications to Gastric Cancer Drug (5-Fluorouracil) Marker Identification.
    Park H; Imoto S; Miyano S
    J Comput Biol; 2023 Feb; 30(2):223-243. PubMed ID: 36450117
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CMIP: a software package capable of reconstructing genome-wide regulatory networks using gene expression data.
    Zheng G; Xu Y; Zhang X; Liu ZP; Wang Z; Chen L; Zhu XG
    BMC Bioinformatics; 2016 Dec; 17(Suppl 17):535. PubMed ID: 28155637
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Growing seed genes from time series data and thresholded Boolean networks with perturbation.
    Higa CH; Andrade TP; Hashimoto RF
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(1):37-49. PubMed ID: 23702542
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A Consensus Gene Regulatory Network for Neurodegenerative Diseases Using Single-Cell RNA-Seq Data.
    Koumadorakis DE; Krokidis MG; Dimitrakopoulos GN; Vrahatis AG
    Adv Exp Med Biol; 2023; 1423():215-224. PubMed ID: 37525047
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Harnessing diversity towards the reconstructing of large scale gene regulatory networks.
    Hase T; Ghosh S; Yamanaka R; Kitano H
    PLoS Comput Biol; 2013; 9(11):e1003361. PubMed ID: 24278007
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Hybrid method inference for the construction of cooperative regulatory network in human.
    Chebil I; Nicolle R; Santini G; Rouveirol C; Elati M
    IEEE Trans Nanobioscience; 2014 Jun; 13(2):97-103. PubMed ID: 24771593
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Reconstructing Genetic Regulatory Networks Using Two-Step Algorithms with the Differential Equation Models of Neural Networks.
    Chen CK
    Interdiscip Sci; 2018 Dec; 10(4):823-835. PubMed ID: 28748400
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A Bi-Objective RNN Model to Reconstruct Gene Regulatory Network: A Modified Multi-Objective Simulated Annealing Approach.
    Biswas S; Acharyya S
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(6):2053-2059. PubMed ID: 29990170
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.