BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

204 related articles for article (PubMed ID: 22913541)

  • 1. Probing murine methyltransfease Dnmt3a interactions with benzo[a]pyrene-modified DNA by fluorescence methods.
    Minero AS; Lukashevich OV; Cherepanova NA; Kolbanovskiy A; Geacintov NE; Gromova ES
    FEBS J; 2012 Oct; 279(20):3965-80. PubMed ID: 22913541
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Dnmt3a-CD is less susceptible to bulky benzo[a]pyrene diol epoxide-derived DNA lesions than prokaryotic DNA methyltransferases.
    Lukashevich OV; Baskunov VB; Darii MV; Kolbanovskiy A; Baykov AA; Gromova ES
    Biochemistry; 2011 Feb; 50(5):875-81. PubMed ID: 21174446
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement.
    Zhang N; Lin C; Huang X; Kolbanovskiy A; Hingerty BE; Amin S; Broyde S; Geacintov NE; Patel DJ
    J Mol Biol; 2005 Mar; 346(4):951-65. PubMed ID: 15701509
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M; Hingerty BE; Luneva N; Amin S; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1996 Jul; 35(30):9850-63. PubMed ID: 8703959
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The stereochemistry of benzo[a]pyrene-2'-deoxyguanosine adducts affects DNA methylation by SssI and HhaI DNA methyltransferases.
    Subach OM; Maltseva DV; Shastry A; Kolbanovskiy A; Klimasauskas S; Geacintov NE; Gromova ES
    FEBS J; 2007 Apr; 274(8):2121-34. PubMed ID: 17388812
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Impact of benzo[a]pyrene-2'-deoxyguanosine lesions on methylation of DNA by SssI and HhaI DNA methyltransferases.
    Subach OM; Baskunov VB; Darii MV; Maltseva DV; Alexandrov DA; Kirsanova OV; Kolbanovskiy A; Kolbanovskiy M; Johnson F; Bonala R; Geacintov NE; Gromova ES
    Biochemistry; 2006 May; 45(19):6142-59. PubMed ID: 16681387
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Solution structure of the (+)-cis-anti-benzo[a]pyrene-dA ([BP]dA) adduct opposite dT in a DNA duplex.
    Mao B; Gu Z; Gorin A; Chen J; Hingerty BE; Amin S; Broyde S; Geacintov NE; Patel DJ
    Biochemistry; 1999 Aug; 38(33):10831-42. PubMed ID: 10451380
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Extending the understanding of mutagenicity: structural insights into primer-extension past a benzo[a]pyrene diol epoxide-DNA adduct.
    Perlow RA; Broyde S
    J Mol Biol; 2003 Apr; 327(4):797-818. PubMed ID: 12654264
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Solution conformation of the (+)-cis-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Cosman M; Fiala R; Hingerty BE; Amin S; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1994 Sep; 33(38):11518-27. PubMed ID: 7918365
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Formation and persistence of benzo[a]pyrene-DNA adducts in mouse epidermis in vivo: importance of adduct conformation.
    Suh M; Ariese F; Small GJ; Jankowiak R; Hewer A; Phillips DH
    Carcinogenesis; 1995 Oct; 16(10):2561-9. PubMed ID: 7586167
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Resistance to Nucleotide Excision Repair of Bulky Guanine Adducts Opposite Abasic Sites in DNA Duplexes and Relationships between Structure and Function.
    Liu Z; Ding S; Kropachev K; Jia L; Amin S; Broyde S; Geacintov NE
    PLoS One; 2015; 10(9):e0137124. PubMed ID: 26340000
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Solution conformation of the (+)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M; Fiala R; Hingerty BE; Amin S; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1994 Sep; 33(38):11507-17. PubMed ID: 7918364
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Effects of benzo[a]pyrene-deoxyguanosine lesions on DNA methylation catalyzed by EcoRII DNA methyltransferase and on DNA cleavage effected by EcoRII restriction endonuclease.
    Baskunov VB; Subach FV; Kolbanovskiy A; Kolbanovskiy M; Eremin SA; Johnson F; Bonala R; Geacintov NE; Gromova ES
    Biochemistry; 2005 Jan; 44(3):1054-66. PubMed ID: 15654762
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Structural alignments of (+)- and (-)-trans-anti-benzo[a]pyrene-dG adducts positioned at a DNA template-primer junction.
    Cosman M; Hingerty BE; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1995 Nov; 34(46):15334-50. PubMed ID: 7578150
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Solution conformation of the (-)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Feng B; Gorin A; Kolbanovskiy A; Hingerty BE; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1997 Nov; 36(45):13780-90. PubMed ID: 9374854
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Fluorescence characteristics of site-specific and stereochemically distinct benzo[a]pyrene diol epoxide-DNA adducts as probes of adduct conformation.
    Huang W; Amin S; Geacintov NE
    Chem Res Toxicol; 2002 Feb; 15(2):118-26. PubMed ID: 11849037
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Conformational changes of a benzo[a]pyrene diol epoxide-N(2)-dG adduct induced by a 5'-flanking 5-methyl-substituted cytosine in a (Me)CG double-stranded oligonucleotide sequence context.
    Huang X; Colgate KC; Kolbanovskiy A; Amin S; Geacintov NE
    Chem Res Toxicol; 2002 Mar; 15(3):438-44. PubMed ID: 11896693
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structural alignment of the (+)-trans-anti-benzo[a]pyrene-dG adduct positioned opposite dC at a DNA template-primer junction.
    Feng B; Gorin A; Hingerty BE; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1997 Nov; 36(45):13769-79. PubMed ID: 9374853
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Intercalative conformations of the 14R (+)- and 14S (-)-trans-anti-DB[a,l]P-N⁶-dA adducts: molecular modeling and MD simulations.
    Cai Y; Ding S; Geacintov NE; Broyde S
    Chem Res Toxicol; 2011 Apr; 24(4):522-31. PubMed ID: 21361377
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Synthesis and characterization of site-specific and stereoisomeric fjord dibenzo[a,l]pyrene diol epoxide-N(6)-adenine adducts: unusual thermal stabilization of modified DNA duplexes.
    Ruan Q; Kolbanovskiy A; Zhuang P; Chen J; Krzeminski J; Amin S; Geacintov NE
    Chem Res Toxicol; 2002 Feb; 15(2):249-61. PubMed ID: 11849052
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.