BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

593 related articles for article (PubMed ID: 22929775)

  • 1. Genome-wide mapping of nucleosome occupancy, histone modifications, and gene expression using next-generation sequencing technology.
    Wei G; Hu G; Cui K; Zhao K
    Methods Enzymol; 2012; 513():297-313. PubMed ID: 22929775
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Characterization of the Nucleosome Landscape by Micrococcal Nuclease-Sequencing (MNase-seq).
    Hoeijmakers WAM; Bártfai R
    Methods Mol Biol; 2018; 1689():83-101. PubMed ID: 29027167
    [TBL] [Abstract][Full Text] [Related]  

  • 3. High-Resolution Genome-Wide Mapping of Nucleosome Positioning and Occupancy Level Using Paired-End Sequencing Technology.
    Brunelle M; Rodrigue S; Jacques PÉ; Gévry N
    Methods Mol Biol; 2017; 1528():229-243. PubMed ID: 27854025
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Profiling Nucleosome Occupancy by MNase-seq: Experimental Protocol and Computational Analysis.
    Pajoro A; Muiño JM; Angenent GC; Kaufmann K
    Methods Mol Biol; 2018; 1675():167-181. PubMed ID: 29052192
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genome-wide mapping of nucleosomes in yeast using paired-end sequencing.
    Cole HA; Howard BH; Clark DJ
    Methods Enzymol; 2012; 513():145-68. PubMed ID: 22929768
    [TBL] [Abstract][Full Text] [Related]  

  • 6. High-Resolution ChIP-MNase Mapping of Nucleosome Positions at Selected Genomic Loci and Alleles.
    van Essen D; Oruba A; Saccani S
    Methods Mol Biol; 2021; 2351():123-145. PubMed ID: 34382187
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome-wide mapping of nucleosome positions in yeast using high-resolution MNase ChIP-Seq.
    Wal M; Pugh BF
    Methods Enzymol; 2012; 513():233-50. PubMed ID: 22929772
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Single-Assay Profiling of Nucleosome Occupancy and Chromatin Accessibility.
    Cook A; Mieczkowski J; Tolstorukov MY
    Curr Protoc Mol Biol; 2017 Oct; 120():21.34.1-21.34.18. PubMed ID: 28967996
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning.
    Gutiérrez G; Millán-Zambrano G; Medina DA; Jordán-Pla A; Pérez-Ortín JE; Peñate X; Chávez S
    Epigenetics Chromatin; 2017 Dec; 10(1):58. PubMed ID: 29212533
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Nucleosome-driven transcription factor binding and gene regulation.
    Ballaré C; Castellano G; Gaveglia L; Althammer S; González-Vallinas J; Eyras E; Le Dily F; Zaurin R; Soronellas D; Vicent GP; Beato M
    Mol Cell; 2013 Jan; 49(1):67-79. PubMed ID: 23177737
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Generation of Native Chromatin Immunoprecipitation Sequencing Libraries for Nucleosome Density Analysis.
    Lorzadeh A; Lopez Gutierrez R; Jackson L; Moksa M; Hirst M
    J Vis Exp; 2017 Dec; (130):. PubMed ID: 29286469
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Bioinformatic Analysis of Nucleosome and Histone Variant Positioning.
    Mieczkowski J; Tolstorukov MY
    Methods Mol Biol; 2018; 1832():185-203. PubMed ID: 30073528
    [TBL] [Abstract][Full Text] [Related]  

  • 13. NucTools: analysis of chromatin feature occupancy profiles from high-throughput sequencing data.
    Vainshtein Y; Rippe K; Teif VB
    BMC Genomics; 2017 Feb; 18(1):158. PubMed ID: 28196481
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Application of MNase-Seq in the Global Mapping of Nucleosome Positioning in Plants.
    Zhang W; Jiang J
    Methods Mol Biol; 2018; 1830():353-366. PubMed ID: 30043381
    [TBL] [Abstract][Full Text] [Related]  

  • 15. High-resolution genome-wide mapping of histone modifications.
    Roh TY; Ngau WC; Cui K; Landsman D; Zhao K
    Nat Biotechnol; 2004 Aug; 22(8):1013-6. PubMed ID: 15235610
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Distinct features of lamin A-interacting chromatin domains mapped by ChIP-sequencing from sonicated or micrococcal nuclease-digested chromatin.
    Lund EG; Duband-Goulet I; Oldenburg A; Buendia B; Collas P
    Nucleus; 2015; 6(1):30-9. PubMed ID: 25602132
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mapping nucleosome positions using DNase-seq.
    Zhong J; Luo K; Winter PS; Crawford GE; Iversen ES; Hartemink AJ
    Genome Res; 2016 Mar; 26(3):351-64. PubMed ID: 26772197
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Analysis of chromatin organization by deep sequencing technologies.
    Platt JL; Kent NA; Harwood AJ; Kimmel AR
    Methods Mol Biol; 2013; 983():173-83. PubMed ID: 23494307
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Asymmetric nucleosomes flank promoters in the budding yeast genome.
    Ramachandran S; Zentner GE; Henikoff S
    Genome Res; 2015 Mar; 25(3):381-90. PubMed ID: 25491770
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Analyzing the global chromatin structure of keratinocytes by MNase-seq.
    Rizzo JM; Sinha S
    Methods Mol Biol; 2014; 1195():49-59. PubMed ID: 24676786
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 30.