177 related articles for article (PubMed ID: 22929776)
1. A chemical approach to mapping nucleosomes at base pair resolution in yeast.
Brogaard KR; Xi L; Wang JP; Widom J
Methods Enzymol; 2012; 513():315-34. PubMed ID: 22929776
[TBL] [Abstract][Full Text] [Related]
2. A map of nucleosome positions in yeast at base-pair resolution.
Brogaard K; Xi L; Wang JP; Widom J
Nature; 2012 Jun; 486(7404):496-501. PubMed ID: 22722846
[TBL] [Abstract][Full Text] [Related]
3. Genome-Wide Analysis of Nucleosome Positions, Occupancy, and Accessibility in Yeast: Nucleosome Mapping, High-Resolution Histone ChIP, and NCAM.
Rodriguez J; McKnight JN; Tsukiyama T
Curr Protoc Mol Biol; 2014 Oct; 108():21.28.1-21.28.16. PubMed ID: 25271716
[TBL] [Abstract][Full Text] [Related]
4. Genome-wide mapping of nucleosomes in yeast using paired-end sequencing.
Cole HA; Howard BH; Clark DJ
Methods Enzymol; 2012; 513():145-68. PubMed ID: 22929768
[TBL] [Abstract][Full Text] [Related]
5. Thermodynamic modeling of genome-wide nucleosome depleted regions in yeast.
Kharerin H; Bai L
PLoS Comput Biol; 2021 Jan; 17(1):e1008560. PubMed ID: 33428627
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide in vitro reconstitution of yeast chromatin with in vivo-like nucleosome positioning.
Krietenstein N; Wippo CJ; Lieleg C; Korber P
Methods Enzymol; 2012; 513():205-32. PubMed ID: 22929771
[TBL] [Abstract][Full Text] [Related]
7. "Point" centromeres of Saccharomyces harbor single centromere-specific nucleosomes.
Henikoff S; Henikoff JG
Genetics; 2012 Apr; 190(4):1575-7. PubMed ID: 22234856
[TBL] [Abstract][Full Text] [Related]
8. A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome.
Mavrich TN; Ioshikhes IP; Venters BJ; Jiang C; Tomsho LP; Qi J; Schuster SC; Albert I; Pugh BF
Genome Res; 2008 Jul; 18(7):1073-83. PubMed ID: 18550805
[TBL] [Abstract][Full Text] [Related]
9. Genome-scale identification of nucleosome positions in S. cerevisiae.
Yuan GC; Liu YJ; Dion MF; Slack MD; Wu LF; Altschuler SJ; Rando OJ
Science; 2005 Jul; 309(5734):626-30. PubMed ID: 15961632
[TBL] [Abstract][Full Text] [Related]
10. Chromatin structure of the yeast URA3 gene at high resolution provides insight into structure and positioning of nucleosomes in the chromosomal context.
Tanaka S; Livingstone-Zatchej M; Thoma F
J Mol Biol; 1996 Apr; 257(5):919-34. PubMed ID: 8632475
[TBL] [Abstract][Full Text] [Related]
11. Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.
Albert I; Mavrich TN; Tomsho LP; Qi J; Zanton SJ; Schuster SC; Pugh BF
Nature; 2007 Mar; 446(7135):572-6. PubMed ID: 17392789
[TBL] [Abstract][Full Text] [Related]
12. In vivo mapping of nucleosomes using psoralen-DNA crosslinking and primer extension.
Wellinger RE; Sogo JM
Nucleic Acids Res; 1998 Mar; 26(6):1544-5. PubMed ID: 9490804
[TBL] [Abstract][Full Text] [Related]
13. Micro-C XL: assaying chromosome conformation from the nucleosome to the entire genome.
Hsieh TS; Fudenberg G; Goloborodko A; Rando OJ
Nat Methods; 2016 Dec; 13(12):1009-1011. PubMed ID: 27723753
[TBL] [Abstract][Full Text] [Related]
14. Sequence-directed nucleosome-depletion is sufficient to activate transcription from a yeast core promoter in vivo.
Ichikawa Y; Morohashi N; Tomita N; Mitchell AP; Kurumizaka H; Shimizu M
Biochem Biophys Res Commun; 2016 Jul; 476(2):57-62. PubMed ID: 27208777
[TBL] [Abstract][Full Text] [Related]
15. Nucleosome positioning by genomic excluding-energy barriers.
Milani P; Chevereau G; Vaillant C; Audit B; Haftek-Terreau Z; Marilley M; Bouvet P; Argoul F; Arneodo A
Proc Natl Acad Sci U S A; 2009 Dec; 106(52):22257-62. PubMed ID: 20018700
[TBL] [Abstract][Full Text] [Related]
16. A genomic code for nucleosome positioning.
Segal E; Fondufe-Mittendorf Y; Chen L; Thåström A; Field Y; Moore IK; Wang JP; Widom J
Nature; 2006 Aug; 442(7104):772-8. PubMed ID: 16862119
[TBL] [Abstract][Full Text] [Related]
17. Absolute nucleosome occupancy map for the
Oberbeckmann E; Wolff M; Krietenstein N; Heron M; Ellins JL; Schmid A; Krebs S; Blum H; Gerland U; Korber P
Genome Res; 2019 Dec; 29(12):1996-2009. PubMed ID: 31694866
[TBL] [Abstract][Full Text] [Related]
18. Genome-wide mapping of nucleosomes in yeast.
Rando OJ
Methods Enzymol; 2010; 470():105-18. PubMed ID: 20946808
[TBL] [Abstract][Full Text] [Related]
19. The DNA-encoded nucleosome organization of a eukaryotic genome.
Kaplan N; Moore IK; Fondufe-Mittendorf Y; Gossett AJ; Tillo D; Field Y; LeProust EM; Hughes TR; Lieb JD; Widom J; Segal E
Nature; 2009 Mar; 458(7236):362-6. PubMed ID: 19092803
[TBL] [Abstract][Full Text] [Related]
20. Nucleosome positioning based on the sequence word composition.
Yi XF; He ZS; Chou KC; Kong XY
Protein Pept Lett; 2012 Jan; 19(1):79-90. PubMed ID: 21919856
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
