162 related articles for article (PubMed ID: 22942675)
1. A blueprint for a mutationist theory of replicative strand asymmetries formation.
Khrustalev VV; Barkovsky EV
Curr Genomics; 2012 Mar; 13(1):55-64. PubMed ID: 22942675
[TBL] [Abstract][Full Text] [Related]
2. The probability of nonsense mutation caused by replication-associated mutational pressure is much higher for bacterial genes from lagging than from leading strands.
Khrustalev VV; Barkovsky EV
Genomics; 2010 Sep; 96(3):173-80. PubMed ID: 20600808
[TBL] [Abstract][Full Text] [Related]
3. GC skew in protein-coding genes between the leading and lagging strands in bacterial genomes: new substitution models incorporating strand bias.
Marín A; Xia X
J Theor Biol; 2008 Aug; 253(3):508-13. PubMed ID: 18486155
[TBL] [Abstract][Full Text] [Related]
4. "Protoisochores" in certain archaeal species are formed by replication-associated mutational pressure.
Khrustalev VV; Barkovsky EV
Biochimie; 2011 Feb; 93(2):160-7. PubMed ID: 20850498
[TBL] [Abstract][Full Text] [Related]
5. Separate base usages of genes located on the leading and lagging strands in Chlamydia muridarum revealed by the Z curve method.
Guo FB; Yu XJ
BMC Genomics; 2007 Oct; 8():366. PubMed ID: 17925038
[TBL] [Abstract][Full Text] [Related]
6. Strand compositional asymmetries of nuclear DNA in eukaryotes.
Niu DK; Lin K; Zhang DY
J Mol Evol; 2003 Sep; 57(3):325-34. PubMed ID: 14629042
[TBL] [Abstract][Full Text] [Related]
7. The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes.
Tillier ER; Collins RA
J Mol Evol; 2000 Mar; 50(3):249-57. PubMed ID: 10754068
[TBL] [Abstract][Full Text] [Related]
8. Quantitative analysis of correlation between AT and GC biases among bacterial genomes.
Zhang G; Gao F
PLoS One; 2017; 12(2):e0171408. PubMed ID: 28158313
[TBL] [Abstract][Full Text] [Related]
9. Replication-associated mutational asymmetry in the human genome.
Chen CL; Duquenne L; Audit B; Guilbaud G; Rappailles A; Baker A; Huvet M; d'Aubenton-Carafa Y; Hyrien O; Arneodo A; Thermes C
Mol Biol Evol; 2011 Aug; 28(8):2327-37. PubMed ID: 21368316
[TBL] [Abstract][Full Text] [Related]
10. Translation-Associated Mutational U-Pressure in the First ORF of SARS-CoV-2 and Other Coronaviruses.
Khrustalev VV; Giri R; Khrustaleva TA; Kapuganti SK; Stojarov AN; Poboinev VV
Front Microbiol; 2020; 11():559165. PubMed ID: 33072018
[TBL] [Abstract][Full Text] [Related]
11. Mutational Strand Asymmetries in Cancer Genomes Reveal Mechanisms of DNA Damage and Repair.
Haradhvala NJ; Polak P; Stojanov P; Covington KR; Shinbrot E; Hess JM; Rheinbay E; Kim J; Maruvka YE; Braunstein LZ; Kamburov A; Hanawalt PC; Wheeler DA; Koren A; Lawrence MS; Getz G
Cell; 2016 Jan; 164(3):538-49. PubMed ID: 26806129
[TBL] [Abstract][Full Text] [Related]
12. Strand-biased cytosine deamination at the replication fork causes cytosine to thymine mutations in Escherichia coli.
Bhagwat AS; Hao W; Townes JP; Lee H; Tang H; Foster PL
Proc Natl Acad Sci U S A; 2016 Feb; 113(8):2176-81. PubMed ID: 26839411
[TBL] [Abstract][Full Text] [Related]
13. Composition strand asymmetries in prokaryotic genomes: mutational bias and biased gene orientation.
Lopez P; Philippe H
C R Acad Sci III; 2001 Mar; 324(3):201-8. PubMed ID: 11291306
[TBL] [Abstract][Full Text] [Related]
14. Whole-genome mutational biases in bacteria.
Lind PA; Andersson DI
Proc Natl Acad Sci U S A; 2008 Nov; 105(46):17878-83. PubMed ID: 19001264
[TBL] [Abstract][Full Text] [Related]
15. Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases.
Lafay B; Lloyd AT; McLean MJ; Devine KM; Sharp PM; Wolfe KH
Nucleic Acids Res; 1999 Apr; 27(7):1642-9. PubMed ID: 10075995
[TBL] [Abstract][Full Text] [Related]
16. Strand asymmetries across genomic processes.
Moeckel C; Zaravinos A; Georgakopoulos-Soares I
Comput Struct Biotechnol J; 2023; 21():2036-2047. PubMed ID: 36968020
[TBL] [Abstract][Full Text] [Related]
17. DNA asymmetry and the replicational mutational pressure.
Kowalczuk M; Mackiewicz P; Mackiewicz D; Nowicka A; Dudkiewicz M; Dudek MR; Cebrat S
J Appl Genet; 2001; 42(4):553-77. PubMed ID: 14564030
[TBL] [Abstract][Full Text] [Related]
18. Differential replication of a single, UV-induced lesion in the leading or lagging strand by a human cell extract: fork uncoupling or gap formation.
Svoboda DL; Vos JM
Proc Natl Acad Sci U S A; 1995 Dec; 92(26):11975-9. PubMed ID: 8618826
[TBL] [Abstract][Full Text] [Related]
19. The differential killing of genes by inversions in prokaryotic genomes.
Mackiewicz P; Mackiewicz D; Gierlik A; Kowalczuk M; Nowicka A; Dudkiewicz M; Dudek MR; Cebrat S
J Mol Evol; 2001 Dec; 53(6):615-21. PubMed ID: 11677621
[TBL] [Abstract][Full Text] [Related]
20. Transcription-induced mutational strand bias and its effect on substitution rates in human genes.
Mugal CF; von Grünberg HH; Peifer M
Mol Biol Evol; 2009 Jan; 26(1):131-42. PubMed ID: 18974087
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]