These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

274 related articles for article (PubMed ID: 22955981)

  • 1. Personal and population genomics of human regulatory variation.
    Vernot B; Stergachis AB; Maurano MT; Vierstra J; Neph S; Thurman RE; Stamatoyannopoulos JA; Akey JM
    Genome Res; 2012 Sep; 22(9):1689-97. PubMed ID: 22955981
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Systematic localization of common disease-associated variation in regulatory DNA.
    Maurano MT; Humbert R; Rynes E; Thurman RE; Haugen E; Wang H; Reynolds AP; Sandstrom R; Qu H; Brody J; Shafer A; Neri F; Lee K; Kutyavin T; Stehling-Sun S; Johnson AK; Canfield TK; Giste E; Diegel M; Bates D; Hansen RS; Neph S; Sabo PJ; Heimfeld S; Raubitschek A; Ziegler S; Cotsapas C; Sotoodehnia N; Glass I; Sunyaev SR; Kaul R; Stamatoyannopoulos JA
    Science; 2012 Sep; 337(6099):1190-5. PubMed ID: 22955828
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The accessible chromatin landscape of the human genome.
    Thurman RE; Rynes E; Humbert R; Vierstra J; Maurano MT; Haugen E; Sheffield NC; Stergachis AB; Wang H; Vernot B; Garg K; John S; Sandstrom R; Bates D; Boatman L; Canfield TK; Diegel M; Dunn D; Ebersol AK; Frum T; Giste E; Johnson AK; Johnson EM; Kutyavin T; Lajoie B; Lee BK; Lee K; London D; Lotakis D; Neph S; Neri F; Nguyen ED; Qu H; Reynolds AP; Roach V; Safi A; Sanchez ME; Sanyal A; Shafer A; Simon JM; Song L; Vong S; Weaver M; Yan Y; Zhang Z; Zhang Z; Lenhard B; Tewari M; Dorschner MO; Hansen RS; Navas PA; Stamatoyannopoulos G; Iyer VR; Lieb JD; Sunyaev SR; Akey JM; Sabo PJ; Kaul R; Furey TS; Dekker J; Crawford GE; Stamatoyannopoulos JA
    Nature; 2012 Sep; 489(7414):75-82. PubMed ID: 22955617
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Population genomics and transcriptional consequences of regulatory motif variation in globally diverse Saccharomyces cerevisiae strains.
    Connelly CF; Skelly DA; Dunham MJ; Akey JM
    Mol Biol Evol; 2013 Jul; 30(7):1605-13. PubMed ID: 23619145
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evolution of DNAase I Hypersensitive Sites in MHC Regulatory Regions of Primates.
    Jin Y; Gittelman RM; Lu Y; Liu X; Li MD; Ling F; Akey JM
    Genetics; 2018 Jun; 209(2):579-589. PubMed ID: 29669733
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comprehensive identification and analysis of human accelerated regulatory DNA.
    Gittelman RM; Hun E; Ay F; Madeoy J; Pennacchio L; Noble WS; Hawkins RD; Akey JM
    Genome Res; 2015 Sep; 25(9):1245-55. PubMed ID: 26104583
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Natural Selection and Functional Potentials of Human Noncoding Elements Revealed by Analysis of Next Generation Sequencing Data.
    Jha P; Lu D; Xu S
    PLoS One; 2015; 10(6):e0129023. PubMed ID: 26053627
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-scale identification of Caenorhabditis elegans regulatory elements by tiling-array mapping of DNase I hypersensitive sites.
    Shi B; Guo X; Wu T; Sheng S; Wang J; Skogerbø G; Zhu X; Chen R
    BMC Genomics; 2009 Feb; 10():92. PubMed ID: 19243610
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Global reference mapping of human transcription factor footprints.
    Vierstra J; Lazar J; Sandstrom R; Halow J; Lee K; Bates D; Diegel M; Dunn D; Neri F; Haugen E; Rynes E; Reynolds A; Nelson J; Johnson A; Frerker M; Buckley M; Kaul R; Meuleman W; Stamatoyannopoulos JA
    Nature; 2020 Jul; 583(7818):729-736. PubMed ID: 32728250
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions.
    Sheffield NC; Thurman RE; Song L; Safi A; Stamatoyannopoulos JA; Lenhard B; Crawford GE; Furey TS
    Genome Res; 2013 May; 23(5):777-88. PubMed ID: 23482648
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Advances of DNase-seq for mapping active gene regulatory elements across the genome in animals.
    Chen A; Chen D; Chen Y
    Gene; 2018 Aug; 667():83-94. PubMed ID: 29772251
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The human noncoding genome defined by genetic diversity.
    di Iulio J; Bartha I; Wong EHM; Yu HC; Lavrenko V; Yang D; Jung I; Hicks MA; Shah N; Kirkness EF; Fabani MM; Biggs WH; Ren B; Venter JC; Telenti A
    Nat Genet; 2018 Mar; 50(3):333-337. PubMed ID: 29483654
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An expansive human regulatory lexicon encoded in transcription factor footprints.
    Neph S; Vierstra J; Stergachis AB; Reynolds AP; Haugen E; Vernot B; Thurman RE; John S; Sandstrom R; Johnson AK; Maurano MT; Humbert R; Rynes E; Wang H; Vong S; Lee K; Bates D; Diegel M; Roach V; Dunn D; Neri J; Schafer A; Hansen RS; Kutyavin T; Giste E; Weaver M; Canfield T; Sabo P; Zhang M; Balasundaram G; Byron R; MacCoss MJ; Akey JM; Bender MA; Groudine M; Kaul R; Stamatoyannopoulos JA
    Nature; 2012 Sep; 489(7414):83-90. PubMed ID: 22955618
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genome-Wide Identification of Regulatory DNA Elements in Crop Plants.
    Li Z; Wang K
    Methods Mol Biol; 2020; 2072():85-99. PubMed ID: 31541440
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Evolutionary constraint facilitates interpretation of genetic variation in resequenced human genomes.
    Goode DL; Cooper GM; Schmutz J; Dickson M; Gonzales E; Tsai M; Karra K; Davydov E; Batzoglou S; Myers RM; Sidow A
    Genome Res; 2010 Mar; 20(3):301-10. PubMed ID: 20067941
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genome-Wide Characterization of DNase I-Hypersensitive Sites and Cold Response Regulatory Landscapes in Grasses.
    Han J; Wang P; Wang Q; Lin Q; Chen Z; Yu G; Miao C; Dao Y; Wu R; Schnable JC; Tang H; Wang K
    Plant Cell; 2020 Aug; 32(8):2457-2473. PubMed ID: 32471863
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Index and biological spectrum of human DNase I hypersensitive sites.
    Meuleman W; Muratov A; Rynes E; Halow J; Lee K; Bates D; Diegel M; Dunn D; Neri F; Teodosiadis A; Reynolds A; Haugen E; Nelson J; Johnson A; Frerker M; Buckley M; Sandstrom R; Vierstra J; Kaul R; Stamatoyannopoulos J
    Nature; 2020 Aug; 584(7820):244-251. PubMed ID: 32728217
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection.
    Shibata Y; Sheffield NC; Fedrigo O; Babbitt CC; Wortham M; Tewari AK; London D; Song L; Lee BK; Iyer VR; Parker SC; Margulies EH; Wray GA; Furey TS; Crawford GE
    PLoS Genet; 2012 Jun; 8(6):e1002789. PubMed ID: 22761590
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome-Wide Identification of Regulatory Sequences Undergoing Accelerated Evolution in the Human Genome.
    Dong X; Wang X; Zhang F; Tian W
    Mol Biol Evol; 2016 Oct; 33(10):2565-75. PubMed ID: 27401230
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution.
    Vierstra J; Rynes E; Sandstrom R; Zhang M; Canfield T; Hansen RS; Stehling-Sun S; Sabo PJ; Byron R; Humbert R; Thurman RE; Johnson AK; Vong S; Lee K; Bates D; Neri F; Diegel M; Giste E; Haugen E; Dunn D; Wilken MS; Josefowicz S; Samstein R; Chang KH; Eichler EE; De Bruijn M; Reh TA; Skoultchi A; Rudensky A; Orkin SH; Papayannopoulou T; Treuting PM; Selleri L; Kaul R; Groudine M; Bender MA; Stamatoyannopoulos JA
    Science; 2014 Nov; 346(6212):1007-12. PubMed ID: 25411453
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.