These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

151 related articles for article (PubMed ID: 22962456)

  • 21. Inferring ancestral gene orders for a family of tandemly arrayed genes.
    Bertrand D; Lajoie M; El-Mabrouk N
    J Comput Biol; 2008 Oct; 15(8):1063-77. PubMed ID: 18781832
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Automatic genome-wide reconstruction of phylogenetic gene trees.
    Wapinski I; Pfeffer A; Friedman N; Regev A
    Bioinformatics; 2007 Jul; 23(13):i549-58. PubMed ID: 17646342
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Gene tree and species tree reconciliation with endosymbiotic gene transfer.
    Anselmetti Y; El-Mabrouk N; Lafond M; Ouangraoua A
    Bioinformatics; 2021 Jul; 37(Suppl_1):i120-i132. PubMed ID: 34252921
    [TBL] [Abstract][Full Text] [Related]  

  • 24. OrthoParaMap: distinguishing orthologs from paralogs by integrating comparative genome data and gene phylogenies.
    Cannon SB; Young ND
    BMC Bioinformatics; 2003 Sep; 4():35. PubMed ID: 12952558
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Phylogeny analysis from gene-order data with massive duplications.
    Zhou L; Lin Y; Feng B; Zhao J; Tang J
    BMC Genomics; 2017 Oct; 18(Suppl 7):760. PubMed ID: 29513196
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Reconstructing ancestral genome content based on symmetrical best alignments and Dollo parsimony.
    Sakarya O; Kosik KS; Oakley TH
    Bioinformatics; 2008 Mar; 24(5):606-12. PubMed ID: 18184685
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Phylogenetic Reconstruction Based on Synteny Block and Gene Adjacencies.
    Drillon G; Champeimont R; Oteri F; Fischer G; Carbone A
    Mol Biol Evol; 2020 Sep; 37(9):2747-2762. PubMed ID: 32384156
    [TBL] [Abstract][Full Text] [Related]  

  • 28. From gene to organismal phylogeny: reconciled trees and the gene tree/species tree problem.
    Page RD; Charleston MA
    Mol Phylogenet Evol; 1997 Apr; 7(2):231-40. PubMed ID: 9126565
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Joint amalgamation of most parsimonious reconciled gene trees.
    Scornavacca C; Jacox E; Szöllősi GJ
    Bioinformatics; 2015 Mar; 31(6):841-8. PubMed ID: 25380957
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Gene family evolution by duplication, speciation, and loss.
    Chauve C; Doyon JP; El-Mabrouk N
    J Comput Biol; 2008 Oct; 15(8):1043-62. PubMed ID: 18781833
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Reconstruction of ancestral gene orders using probabilistic and gene encoding approaches.
    Yang N; Hu F; Zhou L; Tang J
    PLoS One; 2014; 9(10):e108796. PubMed ID: 25302942
    [TBL] [Abstract][Full Text] [Related]  

  • 32. The duplication-loss small phylogeny problem: from cherries to trees.
    Andreotti S; Reinert K; Canzar S
    J Comput Biol; 2013 Sep; 20(9):643-59. PubMed ID: 24000925
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Recovering genome rearrangements in the mammalian phylogeny.
    Zhao H; Bourque G
    Genome Res; 2009 May; 19(5):934-42. PubMed ID: 19411607
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Reconstructing the architecture of the ancestral amniote genome.
    Ouangraoua A; Tannier E; Chauve C
    Bioinformatics; 2011 Oct; 27(19):2664-71. PubMed ID: 21846735
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Reconstruction of ancestral genome reveals chromosome evolution history for selected legume species.
    Ren L; Huang W; Cannon SB
    New Phytol; 2019 Sep; 223(4):2090-2103. PubMed ID: 30834536
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Models, algorithms and programs for phylogeny reconciliation.
    Doyon JP; Ranwez V; Daubin V; Berry V
    Brief Bioinform; 2011 Sep; 12(5):392-400. PubMed ID: 21949266
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Locating large-scale gene duplication events through reconciled trees: implications for identifying ancient polyploidy events in plants.
    Burleigh JG; Bansal MS; Wehe A; Eulenstein O
    J Comput Biol; 2009 Aug; 16(8):1071-83. PubMed ID: 19689214
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models.
    Bansal MS; Burleigh JG; Eulenstein O
    BMC Bioinformatics; 2010 Jan; 11 Suppl 1(Suppl 1):S42. PubMed ID: 20122216
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Small parsimony for natural genomes in the DCJ-indel model.
    Doerr D; Chauve C
    J Bioinform Comput Biol; 2021 Dec; 19(6):2140009. PubMed ID: 34806948
    [TBL] [Abstract][Full Text] [Related]  

  • 40. RecPhyloXML: a format for reconciled gene trees.
    Duchemin W; Gence G; Arigon Chifolleau AM; Arvestad L; Bansal MS; Berry V; Boussau B; Chevenet F; Comte N; Davín AA; Dessimoz C; Dylus D; Hasic D; Mallo D; Planel R; Posada D; Scornavacca C; Szöllosi G; Zhang L; Tannier É; Daubin V
    Bioinformatics; 2018 Nov; 34(21):3646-3652. PubMed ID: 29762653
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.